Shigella sonnei str. 75/02

Gram-negativeRodNon-motileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Shigella

Description

Shigella sonnei str. 75/02 is a Gram-negative, rod-shaped bacterium that typically appears as single cells or in pairs. This strain optimally grows at a temperature of 37.0°C, which corresponds with the normal human body temperature, suggesting an adaptation to a host-associated habitat. As a chemoorganotroph, it derives energy from organic compounds, reflecting its reliance on a nutrient-rich environment often found within host organisms. Additionally, S. sonnei str. 75/02 is classified as a facultative anaerobe, indicating its capability to survive in both aerobic and anaerobic conditions, which may enhance its persistence in diverse microenvironments within the host. The ability of S. sonnei to thrive in the human gastrointestinal tract, coupled with its metabolic flexibility, positions it as a notable member of the enteric microbiota. Understanding these traits can provide insights into its survival strategies and potential interactions within the host, including its response to variations in oxygen availability and nutrient composition. This adaptability may contribute to its competitive edge in colonizing the gut, underscoring the importance of host-associated environments in shaping the physiological traits of pathogenic microbes like Shigella sonnei.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusShigella
SpeciesShigella sonnei
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Shigella sonnei str. 75/02
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceChemoorganotroph
PathogenicityNot Available

Genome Summary

Shigella sonnei str. 75/02

Accession NumberNZ_CP019689.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

4444 genes

Non-Coding Genes

549 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
ycin family proteinBZ172_RS25985Not Available+4740427 - 47406789398.23
protease sohbBZ172_RS25990Not Available-4740714 - 474176339368.7
ycik family oxidoreductaseBZ172_RS25995Not Available+4741983 - 474274127962.6
cob(i)yrinic acid a,c-diamide adenosyltransferaseBZ172_RS26000Not Available+4742738 - 474332822014.2
23s rrna pseudouridine(2605) synthase rlubBZ172_RS26005Not Available-4743368 - 474424032599.3
is3-like element is2 family transposaseBZ172_RS26010Not Available-4744453 - 474556741523.1
l-threonylcarbamoyladenylate synthaseBZ172_RS26015Not Available-4745595 - 474621523213.2
rnase rnmBZ172_RS26020Not Available-4746212 - 474709332606.9
trp operon leader peptideBZ172_RS29425Not Available+4747231 - 47472751737.21
anthranilate synthase component iBZ172_RS26025Not Available+4747367 - 474892957481.7

Displaying genes 4861 – 4870 of 4993 in total

Pathways

16 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites