Escherichia coli str. 3385

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli str. 3385 is a Gram-negative, rod-shaped bacterium that typically exists in pairs or as individual cells. This strain thrives optimally at a temperature of 37.0°C, which aligns with the physiological temperature of its host-associated habitat. E. coli str. 3385 is classified as a facultative anaerobe, indicating its capacity to grow in both the presence and absence of oxygen. The ability to adapt to varying oxygen conditions may provide this strain with a metabolic flexibility that is advantageous in diverse environments, particularly within host organisms. While the specific ecological role of E. coli str. 3385 is not detailed, the general adaptability of E. coli species to the gastrointestinal tract of mammals suggests potential involvement in nutrient processing or microbial community dynamics. Understanding the precise interactions and functions of E. coli str. 3385 within its host could offer insights into microbial ecology and host-microbe interactions, which are crucial for maintaining gut health and homeostasis.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli str. 3385
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli str. 3385


Gene Summary

Adenine Count

28371 bp

Thymine Count

26049 bp

Guanine Count

24498 bp

Cytosine Count

22422 bp

Genome Length

101340 bp

Protein-coding Genes

29 genes

Non-Coding Genes

87 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Is5 transposase and trans-activatorDFS94_RS25065Not Available+23287 - 2426737798.6
type i restriction endonucleaseDFS94_RS25070Not Available+24414 - 2475213133.6
Putative transposase orfbDFS94_RS25075Not Available-24762 - 2517515974.7
Conserved protein of unknown function pdcbDFS94_RS25080Not Available-25180 - 2545810600.9
AttlNot AvailableNot Available+25484 - 25496Not Available
PdcaDFS94_RS25085Not Available-25486 - 256656748.57
Toxin docDFS94_RS25090Not Available-25670 - 2605013616.1
Prevention of host death by doc toxicityDFS94_RS25095Not Available-26050 - 262718133.53
Putative restriction-modification proteinDFS94_RS25100Not Available+26454 - 2801057736.1
Restriction endonuclease subunit sDFS94_RS25105Not Available+28007 - 2927848202.5

Displaying genes 1 – 10 of 5049 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites