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Browse Bacteria
Gram Staining
Gram-positive
Gram-negative
Gram-variable
Unknown
Cell Arrangement
Single
Clusters
Chain
Pairs
Cell Shape
Coccus
Bacilii
Spiral
Other
Pathogenicity
Human Pathogen
Animal Pathogen
Plant Pathogen
Non-pathogenic
Sporulation
Spore-forming
Non-spore-forming
Motility
Motile
Non-motile
Flagella presence
Present
Absent
Chromosomes
Multiple
Single
Oxygen Requirement
All oxygen requirements
Aerobe
Aerobe; anaerobe
Aerobe; facultative anaerobe
Aerobic
aerobic / facultative aerobe/anaerobe
aerobic / microaerophile
Aerotolerant
Anaerobe
Anaerobic
anaerobic / aerobic
anaerobic / aerobic / microaerophile
anaerobic / microaerophile
Facultative
Facultative aerobe
facultative aerobe/anaerobe
facultative aerobe/anaerobe / microaerophile
Facultative anaerobe
Facultative anaerobe, air+co2
Facultatively anaerobe
Facultative anaerobe
Microaerophile
microaerophilic
Obligate aerobic
Obligate anaerobe
Obligate anaerobic
Energy source
All energy sources
Autotroph
autotroph; lithotroph; chemotroph
Biotroph
Chemoautotroph
Chemoheterotroph
Chemolithoautotroph
Chemolithotroph
Chemoorganoheterotroph
Chemoorganotroph
Chemosynthetic
chemotroph
Diazotroph
Heterotroph
heterotroph; chemotroph
heterotroph; organotroph; chemotroph
heterotroph; organotroph; chemotroph; phototroph
Lithoautotroph
Lithoheterotroph
Lithotroph
lithotroph; chemotroph
Methanotroph
Methylotroph
Obligate chemoautolithotroph
Oligotroph
Organoheterotroph
Organotroph
organotroph; chemotroph
Photoautotroph
Photoheterotroph
Photolithoautotroph
Photolithotroph
Photosynthetic
Phototroph
Temperature range
All temperature ranges
Hyperthermophilic
Mesophilic
Psychrophilic
psychrotolerant
Thermophilic
Habitat
All habitats
A mud sample of the hypersaline lake
A. millepora corals; mucus layer; skeleton; water column
Aarhus Bay; Aarhus Bay sediment; Aarhus Bay sediments; cold marine sediments; deep sediments; heated Arctic sediments; sediment; surface sediment; Svalbard; Svalbard fjord; Tyne sediment
abandoned mine
abattoir walls; carcasses; farm walls; liver samples; poultry feed; poultry production chain; raw chicken fillets; slaughterhouse; soiled litter; Tables
abdominal cavity
acid mine drainage; Acid mine drainage; iron-oxidizing mixed culture from a pilot plant for bioremediation of acid mine drainage
acid soils
acid spring; acidic warm spring; Lassen Volcanic National Park; microbial mat; spring; spring in Lassen Volcanic National Park (USA); strongly acidic habitats; sulfidic and acidic (pH 3-4) spring; sulfidic spring; Yellowstone; Yellowstone National Park
acidic environments
acidic soils
acidic soils; acidic tea soils; wastewater treatment processes
acidic, high sulfur environments
Acos system
activated anaerobic sludge
activated sludge
activated sludge systems; Fresh water; Marine; sludge bioreactors
activated sludge; alkaline or hyper-saline environments; aquaculture water; dry surfaces; high altitude lakes; lower respiratory tract; oil-contaminated soil; organic solvents; rhizosphere; sewage sludge; soil; sputum; wastewater treatment plants
activated sludge; human gut; human intestinal tract
activated sludge; pesticide factory
activated sludge; raw wastewater; sewage treatment plants
activated sludge; raw wastewater; sewage treatment plants; soil; treatment plants; wastewater
active carious lesions; fecal samples; oral biofilm; oral cavity; oral environment; saliva
active sludge basin; active sludge basins; cooling towers; drinking and cooling water systems; Fresh water; natural surface water; sludge; soil; waste water aeration ponds; waste water basins; waste water systems; water
active sludge basin; waste water system
active sludge of a wastewater-treatment system
active volcanic area; spoiled canned food
aerobic agricultural surface soils; freshwater lake sediment; terrestrial niche
aerosols; greenhouses
Agbabu bitumen sediments
Agricultural land
agricultural soil
agricultural soil; cropland; forest soil; mycosphere of Lyophyllum sp strain Karsten28; soil; surface soil
agricultural soils
agricultural soils; cogon grass roots; maize rhizosphere; wastewater of atrazine plants
agricultural soils; milk; refrigerated raw milk; soil
agricultural surface water; aquatic; faecal sources
agricultural surface water; manure
Air
Air conditioning systems; cooling tower water; cooling towers; man made water systems; natural and engineered water systems; soil; water cooling tower; water systems
air of cowshed; artisanal Tulum cheese; cheese; dairy; fermented meat; kimchi; silage; Tulum cheese
air sample
air-conditioning systems; Fresh water
air; airborne
air; atmospheric air; Fresh water; soil
air; fecal material; intestinal contents; meat products; meats; milk; wastewater
air; marine sediment; sea sand; soil
air; Marine; peat swamp forest; sea sand; soil
air; medical environment; soil; urine
air; oral cavity; oral environment; periodontal plaque biofilms; submucosal sulcus; upper digestive tract
air; rainwater
alcohol fermentation pit mud; milk
alcoholic beverages; carposphere; climacteric and non-climacteric fruit; fermented beverages; fruit; fruit juices; rotten fruit; spoiled wine; vegetables; wine vinegar
alcoholic beverages; fermented beverages; fruit juices; rotten fruit; vegetables; wine vinegar
alfalfa
Alfalfa soil sample
alkaline waters; monimolimnion; sediments; Soap Lake
almond orchards
Amazonian dark earths; petrol contaminated soil; Tuwa hot spring
Amazonian rainforest; various environments
AMD-related environments
amphibian skin
anaerobic digester
Anaerobic digestor
anaerobic sludge; environment; environmental sources; gastrointestinal tract; infant feces; soil
anaerobic waste/wastewater treatment systems
anaerobic wastewater treatment systems; Japanese paddy field soil
Anderson Lake; Fresh water; lake environment
animal feces; foods; Fresh water
animal feces; organic material; soil; water sources
Animal intestinal microflora
animal sources; Marine; raw milk; surface-ripened cheese
anodic biofilm
anoxic brackish sediments; Baltic Sea; Baltic Sea sediment; Baltic Sea sediments; brackish sediments; estuarine sediments; lake; Marine; oil well; saline lake sediment; sediment; Siberia; South San Francisco Bay salt ponds; Tibet
antacid; Antarctic snow; arsenic contaminated hot spring microbial mat; biofilms; hot springs; Manikaran hot spring; Manikaran hot springs; soil
Antarctic
Antarctic intertidal sandy sediment
Antarctic specimen; Antarctica; Barton Peninsula; King George Island
Antarctica marine sediment; Marine
antibiotic-contaminated sites adjacent to livestock facilities; sediment samples
apoplast spaces; mesophyll; phyllosphere
aquaculture
aquaculture ponds; oil
aquaculture water; soil
aquaculture; Changjiang estuary; Marine
aquaria; aquariums; aquatic environments; brackish water; domestic aquarium; Fresh water; Marine; pools; soil
Aquatic
aquatic environment
aquatic environment; Groundwater
aquatic environment; water distribution systems
aquatic environments
aquatic environments; aquatic/estuarine environment; Fresh water; Marine; sea foods; sediment; shrimp processing facility; water
aquatic environments; Baltic Sea; Baltic Sea environments; biofilms on microplastics; brackish water; coastal areas; coastal canal; coastal Florida Keys; estuarine systems; Fresh water; Marine; sewage; surface waters
aquatic environments; brackish water zone of Suncheon Bay; crew quarters exterior walls; decaying organic matter; Fresh water; grapevine wood; International Space Station; ISS; Marine; soils; washroom surfaces; water
aquatic environments; compost; hospital; plant material compost pile
aquatic environments; drinking water; environment; environments; soil; soil/sediment
aquatic environments; healthy skin
aquatic environments; soil
aquatic environments; South China Sea
aquatic habitats; gills
aquatic habitats; nodules; soil
aquatic habitats; preputial washings of bulls
aquatic origin; soil
aquatic vegetation
aquatic; stratified aquatic environments; terrestrial
aquifers
Arabidopsis thaliana leaf natural site
Arctic Ocean; Atlantic Ocean; Baltic Sea; coastal regions; Heita Bay; Marine; Milazzo Harbor; oceanic areas; oil reservoirs; Pacific Ocean; South China Sea; Thames Estuary; Western Pacific sediment
Arctic Ocean; deep-sea sediment; marine sediment; rumen
Arctic sea ice; sea-ice
Arctic sediment
arid hot and cold deserts; Negev Desert, Israel
Arima Onsen; coastal hot spring; hot spring; Iceland
Arima Onsen; hot spring; nonvolcanic Arima Onsen (hot spring)
Arkashin Schurf; Zavarzin Spring
arsenic (As)-contaminated environment; Fresh water; Hg-contaminated soil
arsenic-contaminated well water; groundwater; rind of a Danish Danbo cheese
artesian well; well of a waterworks
Artic soil
artisanal kefirs
assembly site of the Phoenix spacecraft
Atacama Desert soil
ATCC skin microbiome; guano
Atlantic; coastal bloom; coastal waters; copper test materials for marine ships; copper-based antifouling paint; Equatorial Pacific; equatorial Pacific Ocean; Marine; ocean; open ocean; Pacific Ocean; south, equatorial and north Pacific Ocean
Australian soils
baby faeces; baby feces; infant faeces; infant feces
baby faeces; bovine rumen; calf feces; faeces; gastrointestinal tracts; piglet feces; sewage
Badouzi Fishing Port
BALF; bronchoalveolar lavage fluid
Baltic Sea
Baltic Sea oxic-anoxic interface; Marine
Basque cider
bat guano
bat guano; dust; feces; small intestines; soil; wastewater treatment plant; water
bath and shower water; bath water; baths; cooling towers; decorative fountains; dental unit water; shower water; showers; water environments
beach sand; Marine; saline water sediments; saline-water-related environments
beach sand; mud
beach sand; saline water; saline water sediments; saline-water-related environments
bean field; bean leaf
bean soil; Chinese cabbage soil; fermented and pickled foods; fermented foods; forest soil; maize soil; rhizosphere soil; salted crab; sweet potato soil
bee bread; bee pollen; brood; brood comb; digestive tract; fresh honey; hindgut; honey; honey crop
bee hindgut; gut; ileum; rectum
beebread; flowers; fruits; honey crop; pollen; wines
beef trim
beehives; gut; hive debris
beer
beer fermentation
beer; brewery; cider; wine
beer; grapes; sourdough
beetle gut
Beibu Gulf
Beibu Gulf; Marine
Beibu Gulf; seawater; skin
Belgian artisanal wheat sourdough
benthic
Big Soda Lake
Billings freshwater reservoir; Fresh water
biofilm attached to black smoker chimney; Marine
biofilm sample from a cooling tower
biofilm; coastal microbial mat; mangrove soil; port of Hamburg; Port of Hamburg area; soils; Sundarbans mangrove soil
biofilms of microbial communities of rapid sand filters; soil
biofilms; dust; healthcare settings; soil; water; Water
biofilms; Fresh water; laboratory faucets; pipelines; soil; water in the humidifier reservoir; well water
biogas reactor; digestive tract; microbial mat
black smokers of the East Pacific Rise; hydrothermal field
bladder
blood; feces; intestine
bloom
BM; buccal mucosa; canine oral cavity; dental plaque; mouth; oral cavity; oral microbiome; periodontal pockets; periodontal samples; subgingival; subgingival plaque (SUBP); SUBP; SUPP; supragingival; supragingival plaque; SV; TD; tongue dorsum
BM; oral cavity; plaque; subgingival plaque (SUBP); SUPP; SV; TD; tongue; tongue-dorsum
BM; oral cavity; plaque; subgingival plaque; subgingival plaque (SUBP); SUPP; SV; TD; tongue; tongue-dorsum
Borj cedria soil; rhizosphere
Bornean rainforest; rhizosphere
Botany Bay; Marine; sea; surface coastal waters; surface coastal waters in Botany Bay (Sydney), Australia
bovine milk; Chinese dry sausages; milk; Qianwufu sausage; TA; teat apex; teat apices
bovine milk; milk; TA; teat apices
bovine rumen fluid; rumen of cows
brackish sites; coastal microbial mat; Marine; Schelde Estuary; sediment
brackish water
brain abscesses; dental plaques; mouth; oral cavity
Brazilian sugar cane; rhizosphere
breast milk
breast milk; gastrointestinal tract; gut; human breast milk; human gut; infant gut microbiota; infant intestine; intestines; microbiota of healthy newborns
British salt mines
broiler farms
bronchoalveolar lavage fluid; mucosal surfaces of the oral cavity; oral cavity; oral mucosa; oral mucosa microbiota; tumor tissue
brood pouch
brown seeds
Burlinskoye Lake; Kilroot Salt Mine; saturated brine-pool; silt; water
caeca
caeca; crops
caeca; feces; rectal mucosa
caecal suspensions
caecum
caecum; cecum; intestinal microbiota
caecum; cheese; colon; dairy products; gut; intestine; pit mud
caecum; suckling piglets and rabbits
calcareous bricks mine soil
camel milk
canal
cancerous tissues; contaminated site; heavy metal-contaminated soils; labelling gun; rabbit carcasses; soil; water; Zlate Hory mine
canine feces; gut; human gastrointestinal (GI) tract; human gut
Cantonese sausage; fermented foods; Fontina cheeses; Ragusano
carrots pickled with rice bran and salt; fermented dairy; fermented products; kimchi; meat; plant products; radish pickled with rice bran and salt
cecal and colonic luminal contents; colonic mucosa; gut; gut lumen; lumen
cecal contents
cecal contents; gastrointestinal tract; GI microbiome; GI microbiota; infant GI tract; infant gut; intestine; lower gut
cecal digesta
cecal digesta; cecum
cecal digesta; gut
cecal digesta; human gut
cecum
cecum; coastal and estuarine soil
cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine
cecum; feces
cecum; jejunum
cecum; left-sided colon
cecum; mouse gut
Changjiang estuary; coastal sites; Marine
Changjiang estuary; coral-associated macroalgae symbiome; intertidal zone; Marine
Chazhma Bay; Gulf of Peter the Great; Marine; Pacific Ocean; Sea of Japan
cheese
cheese rind
cheese rind; East Sea; Sea of Japan
cheese rind; mini-cheeses; washed-rind cheeses
cheese; cheese rind
cheese; cheese rind; smear-ripened cheeses
cheese; dairy; dairy products; fermented foods; food products; kimchi; meat; milk; Milk; vegetables; whey; wine
cheese; meat products; pork meat
cheese; milk; pasture; silage; soil
cheeses
chicken intestine
Chili Bo; Korean kimchi; pasture; saliva; soil; tropical fruits
Chinese traditional fermented vegetables; fermented batters; fermented food; gut; Japanese pickles; Minas cheese; olives; sourdough
chloraminated water
chloraminated water; chlorinated water
chlorinated effluent; effluent of a WWTP; pork meat; sewage; sewage environments; sewage-associated aquatic systems; sewage-impacted aquatic environments; skin; treated sewage effluent; WWTP effluent
chocolate milk; dairy products; evaporated milk; feed concentrate; foods; Indian curry; Marine; milk; milking equipment; non-dairy-based foods; raw milk; reconstituted milk; UHT cream; UHT milk; ultra-high-temperature milk products
Chocolate Pots Hot Springs, Yellowstone National Park, WY, USA; iron-depositing hot spring; microbial mat; phototrophic mat
chromate-contaminated soil
chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water
cider; sourdoughs
cider; wine
citrate solution; domestic water; fresh pork meat; vegetables; water
coastal blooms; mudflat; mudflat Y1; pink pool; pink-blooming pool; pink-blooming pool in the tidal flat area; tide pools J1 and J2
coastal blooms; mudflat; pink mudflat; pink pool; pink-blooming mudflat; pink-blooming pool
coastal environments; estuarine environments; Fresh water; Marine
coastal microbial mats; Marine; sediments
coastal sediment of Jiaozhou Bay
coastal sediments
coastal water; Marine; marine biofilms; marine sediments
coastal waters; estuaries; Marine; oceans; seaweeds; sediments
Coastal-marine wetland; Sundarbans mangrove forest
cocoa beans; fermented foods; flower; flowers; fruits
cocoa beans; figs
cocoa beans; tempoyak
coconut water
cold desert of Himalayas, India; pistachio tree
cold desert soil; Marine; mine soil; oil-contaminated water; polluted soils; rhizosphere; sewage sludge
cold deserts of Himachal Pradesh, India; soil
cold environments; grains of sand; Lebanese and Egyptian soils; Soil
cold habitats; hot springs
cold or Arctic habitats
colonic digesta; rumen; sheep rumen
commercial fresh-cut-produce-processing facility
compost
compost pile
compost-amended soil
compost; compost sample
contaminated sites
contaminated waters; Ghana's coastline; Marine; soil; urine; water
continental shelf sediments of the Arabian Sea; Populus euphratica; poultry deep litter
cooked ox blood
cooling towers; hospital water systems; soil; water distribution systems; water networks
cooling towers; water distribution systems; water networks
coral; Marine
coralloid roots
corn roots
Corroded pipe sediment
cotton root soil; rhizosphere soil
cranberry bog soil; rhizospheres of wild cranberry plants
cream; food products; hospitals; host-associated environments; organic-rich aquatic environments; pristine aquatic environments; soil
creek sediments; downstream sediments; polar environment; sewage; sewage-impacted aquatic environments; upstream sediment samples
crop
crude oil contaminated soil; forest soil; mangrove soil; soil; Sundarbans mangrove
Crude oil storage tank
crude oil-contaminated water; Fresh water; Jones Creek oil field; root nodules of leguminous plants; soil; water
crude oil; groundwater
crude-oil contaminated soil; oil contaminated soil; permafrost
crude-oil-contaminated soils; deionized water; Fresh water; normal sewage; sterilized sewage; wastewater
cryoconite; Cryoconite of Wurmkogel; extreme environments
crystallizer pond
cutting and processing laboratories; leaves of cold-adapted plants; meat; milk; processing facilities
dairy farms; dairy products; gastrointestinal tracts of ruminants; rumen
Dairy isolate
dairy processing and storage stages
dairy products; urban sewage sludge
damp areas; environments with high moisture content; Fresh water; hospital floor ward; soil
damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils
Dead Sea
decaying organic matter; soil
decaying straw; manure
decomposing feathers at a poultry processing plant
deep gas storage aquifer; Indian hydrate samples
Deep ground water
deep marine subsurface sediment; deep subseafloor sediment of the Nankai Trough
deep offshore waters in Lake Victoria; Fresh water; Lake Victoria; seafood
deep sea environments
deep sea sediments
Deep sea- Hydrothermal vent- Marine
deep sea; Iheya Ridge hydrothermal vent field of Okinawa Trough
deep sea; Marine
deep sea; North Atlantic Ocean
deep seawater
Deep subsurface shale; hydraulically fractured shale wells; hydraulically fractured wells; oil reservoir; produced water sample from the Utica shale; Utica-Point Pleasant natural gas well
deep-sea
deep-sea environments; deep-sea sediment
deep-sea hydrothermal vents
deep-sea sediment; Deep-sea sediment
deep-sea sediments
deep-sea sources
deep-sea sources; Indian Ocean
deep-sea vents
deep-sea; deep-sea sediment
deep-sea; deepsea; Mariana Trench's Challenger Deep; Tonga-Kermadec subduction zone
Delaware Bay; Hainan Island; mariculture water; Marine
denitrification tank; terrestrial ecosystems; wastewater treatment plant
denitritation bioreactor; Marine
dental microbiota; oral cavity
dental plaque
dental plaque; Dental plaque
dental plaque; Fresh water; Marine; nasal discharge; phyllosphere; rhizosphere; rhizosphere of common reeds; soils; tongue surface
dental plaque; oropharyngeal flora; oropharynx
desert
desert soil
desert soil; rhizosphere
desert spring; dry naturally fermented Greek sausage
Deshan Daqu; milk; mosquito midgut; soil
deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil
DHABs
digestive tract
digestive tract; handsets of telephone booths; meat; milk
domestic washing machines; washing machines
domestic washing machines; washing machines; wastewater
drains of a nail salon; Soils
Drinking water
drinking water; sediment of hot springs; water
dry beach sand; dry sand
dry naturally fermented Greek sausage
dry naturally fermented Greek sausage; fermented butter; Indonesian home-made soya product; sugar cane
dry naturally fermented Greek sausage; sludge of milking machines
dry sugarcane straw; rhizosphere soil
duodenum
dust
dust; indoor dust; Iranian Ab-e-Siah hot springs; Iranian hot spring; skin
early plaque; human pharynx
earthworms; vermicompost
Ebinur Lake; extreme marine environments; high-salt environment; Marine; Mulei; salt farms; salt lakes
ecto- and endo-rhizospheres; ecto- or endo-rhizospheres; nitrogen fixing nodules
ecto- and endo-rhizospheres; ecto- or endo-rhizospheres; nitrogen-fixing nodules; nodular tissues; nodules
ecto- and endo-rhizospheres; rhizosphere; rhizospheric soil
Egyptian soil
Egyptian soil; German soil
electronic waste contaminated soil; permafrost
endosphere of Corchorus olitorius; pork meat
environment
environment; environmental samples; environments
environment; food
environment; food; Fresh water; lake Gr navatn; Marine; Mars analog environments; permafrost
environmental water
environmental; fungi; plants; soil; water
environments with high metal; Water
epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack
eroding rocks
Erythrina brucei root nodule; grape must; root nodules
estuarine; estuarine marshes; Marine; marine biofilms; saline environments
ethanol-based vinegar
Euganean thermal springs
extreme environments; Marine; plant rhizospheres; soils
faeces
Fe(III)-oxide mat communities
fecal
fecal flora
fecal sample
fecal sample; human gut
fecal samples; water poultry farms
feces
feces; gut
feces; gut; gut microbiota
feces; gut; large intestine
feces; gut; rectal mucosa
feces; mud; mud of a stagnant pond; wastewater
feces; rectal mucosa
feet
female reproductive tract; vagina
fermented bamboo shoot; sourdough; suansun
fermented cabbage; fermented foods; fermented seeds; fish; kimchi; meat; milk; vegetables
fermented fish; pla-ra; Thai fermented fish
Fermented food
fermented mare milk
fermented pickles
fermented raw sausages; Harbin dry sausages; raw sausage
field soil; reservoir water
fish pond; oil sands process-affected water (OSPW)
fish-processing wastewater
flower garden; soil
flowers; grapes; wine
fluoride and arsenic co-contaminated sites; petroleum-contaminated site; soil
foods
forest soil
formation water; Gulf of Mexico oil reservoir; high salinity oil reservoir; oil reservoir; Oil reservoirs; subsurface petroleum reservoir systems
formation water; Gulf of Mexico oil reservoir; high salinity oil reservoir; oil reservoir; subsurface petroleum reservoir systems
fresh honey
fresh honey; honey
fresh lactic acid beverage
Fresh water
Fresh water - Mud
Fresh water - Rice paddies - Sediment
Fresh water - Sludge
Fresh water - Soil
Fresh water- Deep sea- Hydrothermal vent
Fresh water- Deep subsurface
Fresh water- Hot spring
Fresh water- Hydrothermal vent- Deep sea- Marine
Fresh water- Oil fields- Sludge- Soil
Fresh water- Sediment
Fresh water- Sludge
Fresh water- Sulfur spring
Fresh water-Hot spring
Fresh water-Marine
Fresh water; freshwater area of the River Schelde Estuary; Marine; Mediterranean soils
Fresh water; gut; rumen; sewage; soil
Fresh water; gut; soil
Fresh water; hospital environments; hospital settings; HostAssociated; soil; water
Fresh water; hydroponic culture of a moss; phyllosphere; plant surfaces; soil
Fresh water; Lake Garda
Fresh water; Marine
Fresh water; Marine; stool
Fresh water; milk; plants; soil
Fresh water; open Atlantic waters
Fresh water; sediment
Fresh water; sewage
Fresh water; small acidic pond
Fresh water; soil
Fresh water; soil; surface water; Tiber River; Upper Oconee River Watershed
Fresh water; soil; water
Fresh water; swampy soils
Fresh water; wastewater; wastewater ecosystems; wastewater microbial communities; wastewater systems; wastewater treatment facilities; wastewater treatment systems; wet soil
Fresh water; water column (pelagic zone) of Lake Mondsee
freshwater sediment
front wall of the building made of white painted bricks; museum s entrance door; nasal; nasal microbiome; NP
fruit surfaces; leaf surface; leaf surfaces
garden soil; soil
gasoline-contaminated groundwater; gasoline-contaminated subsurface aquifer
gasoline-contaminated soil
gastro-intestinal (GI) tract
gastrointestinal environment; ileum
gastrointestinal tract
gastrointestinal tract; gut microbiomes
gastrointestinal tract; gut; gut luminal niche; intestinal tract
gastrointestinal tract; gut; intestinal
gastrointestinal tract; heart
gastrointestinal tract; liver
gastrointestinal tract; oral cavity
gastrointestinal tract; oral cavity; vagina
gastrointestinal tracts of adults and breastfed infants; gut; gut microbiomes; infant gut; infant gut microbiota; Vietnamese gut microbiota
gastrointestinal tracts of ruminants
gastrointestinal; genital tracts; intestinal; oral cavity; oropharyngeal; oropharynx; respiratory; upper respiratory tract; urogenital tract
gate; soil environments
genital tract
genital tract; skin lesions
genitourinary tract
genitourinary tract; peripheral blood leucocytes; throat; urine
geothermal ground waters
geothermal hot springs
Geothermal hot stream
geothermal springs; oil waste
geothermal systems; hot springs; Hot springs; mats; sediments; springs
geothermally heated sea sediments
gingival crevicular fluid; oral cavity; subgingival plaque
gingival sulci; gut; oral cavity; rumen; subgingival and supragingival dental biofilms; subgingival plaque; urogenital tract
gingival sulci; subgingival and supragingival dental biofilms; subgingival plaque
GIT
glacier cryoconite
Gobi desert; upper sand layers of the cold Gobi desert of the Xinjiang region in China
grains of sand
granite residual soil; plant roots; soil
grape must
grassy marshland
gravel; PHB over the gravel; plastic pieces under gravel; Sopapey waters
gravel; water column
Great Artesian Basin
Great Indian Desert soils; petrol contaminated soil; soil
Great Western Erg
ground beef; steak tartare
groundwater
groundwater biofilm
groundwater; surface water
groundwater; surface water; water distribution systems
Groundwater; water
guano
Gujarat oil fields
Gujarat oil fields; oil reservoir
Gulf of Mexico
Gulf of Mexico; marine sediments; methane seep/brine pool; sediments surrounding a brine pool in the Green Canyon Block 233 on the mid-continental slope, Gulf of Mexico
gut
gut biome; sinonasal cavity; stomach; vagina
gut microbiome; infant gut
gut microbiota
gut microbiota; human feces
gut of honeybee; honey
gut; gut microbiome; oral cavity
gut; gut microbiota; intestinal gut; intestine; oral; respiratory tract; vaginal
gut; human faeces; human gut; human intestine
gut; human feces; large intestine
gut; human gut
gut; human gut microbiota
gut; intestinal
gut; intestinal tract
gut; intestines; stool
gut; liver; lungs; vaginal
gut; lower respiratory tract; rhizosphere; sewage water; sputum
gut; rumen
gut; stool
gut; vaginas
guts of nematodes; rhizosphere
H. cricumcincta
harbor in the south of France
health-care facilities
healthy microbiota
heart
heart; liver; lung; lungs
heavy metal-contaminated soil; mangrove environment
heliothermal saline pool
high Arctic permafrost
High-salt lakes
High-temperature oilfield
high-tidal seaweed
highly salinized soil; salinized soil
hives; plants
homes
honeybee gut
hospital environments; hospital washbasin taps; urine; watches of healthcare workers; water filtration devices
hospital environments; plants; soil; water
hospital sewage; intestinal tract; sewage; soil; surface waters
hospital water
Host epidermis
Host gut
HostAssociated
hot compost
hot oilfield water of a North Sea oil reservoir
Hot spring
hot spring sediment
hot spring water
hot spring water; Hot spring water
Hot spring- Fresh water
Hot spring- Solfataric field
hot spring; hot springs; Mono Lake
hot spring; hot springs; sediment of hot springs; water
hot spring; Kamchatka hot springs; terrestrial hot springs
hot spring; Nakabusa Hot Spring
hot spring; sulfate-rich zone estuary
hot spring; terrestrial, high-altitude hot spring
hot springs
hot springs; hydrothermal source microbial biofilm community; hydrothermal system; oligotrophic waters; Steep Cone Geyser
hot springs; roots; Sargassum wightii
hot springs; sediment of hot springs; water
hot water spring
human back skin
human colonic bacteria
Human faeces
human gut
human gut microbiome
human gut microbiota
human gut; ovarian abscess; vaginal discharge
human intestinal microflora; intestinal; oral
human microbiome
human mouth; subgingival plaque; upper respiratory tract
human mouth; upper respiratory tract
Human oral cavity
human oral cavity; oral cavity
human oral microbiome; root canals; sub- and supragingival plaque; subgingival plaque; supra- and sub-gingival plaque; tonsils
human skin; mucous membranes; skin
Human urinary tract
human-constructed water systems; outdoor hot tub spa
Hveragerthi, Iceland
hydrocarbon polluted sediments
hydrocarbon-contaminated saline soil; petroleum-contaminated saline soil
hydrocarbon-contaminated saline soil; petroleum-contaminated saline soil; textile treatment plant
hydrocarbon-contaminated seawater
hydrothermal vent
hydrothermal vent systems
hydrothermal vent systems in the Pacific Ocean
hydrothermal vent systems; Pacific Ocean
Hydrothermal vent- Marine
hydrothermal vent; mine; Pacific Ocean
hypersaline environments; Spanish solar salterns
hypersaline habitats
Hypersaline lake mud
Hypersaline lake water
hypersaline water; Marine; solar saltern
ice shelves
industrially contaminated soils; maize rhizosphere; mixed bacterial culture; soil
industrially contaminated soils; maize rhizosphere; soil
influent; wastewater treatment plant
inoculum
insects; red clay; red clay soil; soil; water
intercellular foliar tissues
intertidal sediments
intestinal microbiome
intestinal resident; wastewater treatment plants
intestinal; oral
intestinal; oral; oral cavity; urinary tracts
intestine
intestine; soil
intestines
iron-rich mats; Loihi Seamount
iron-rich wall sinter
Isla Cristina saltern
Itaipu Lagoon, Rio de Janeiro, Brazil (Brackish to Marine environment)
Italian aquaculture; Marine
Japanese rice paddies; soil
Japanese unhulled rice; rice paddy samples
jejunum
Johor river estuary
kefir
Khilganta soda lake
kimchi
Kiritimati
Korean agricultural soil; rice rhizosphere
Kuwaiti soil
laboratory rodent colonies
Laguna Socompa
Lajas Valley, Cabo Rojo, Puerto Rico
Lake Balkhash; saline lake Balkhash
Lake Bourget; Lake Constance; prealpine lakes
lake mud
Lake Salubria; reservoir
Lake sediment
Lake Victoria
Lake Washington
lake water; rhizosphere of waterside plants
lakes; rainwater cisterns; soil; water sediments
landfill
large intestine
leaf surface; leaf surface areas; lesion of fallen leaves; phyllosphere; rhizosphere; soil; xylem vessels
leaves of tree
legume root nodules
lettuce leaves
Limestone Capitan Formation at 347 m in Lechuguilla Cave, New Mexico, U.S.A.
limestone karst; limestone sample
Linze Desert
lower digestive tract
lower intestinal tract
lower respiratory tract; rumen; sputum
lung
macroalgal substrates
maize rhizosphere soil
Malaysian swamp
malted barley; water kefir
mangrove forest; soil
mangrove soil; Sundarbans mangrove
mangrove soil; Sundarbans; Sundarbans mangrove
mangrove soils
mangrove zone
mangrove-associated wild rice plants; MBR sludges
Marakkanam solar salterns; solar salterns of Cabo Rojo, Puerto Rico
mariculture samples; Marine; microalgal cultures; sand
Marine
Marine - Hot spring
Marine - Sediment
Marine - Skin microflora
Marine - Submarine
marine biofouling material; marine-biofouling material
marine biofouling-material; marine-biofouling material
Marine hydrothermal vents
marine sediment
marine sediment of Sagami Bay
marine sediment; subseafloor sediment; subseafloor sediments
marine sponge
Marine wetland
Marine- Hot spring
Marine- Hydrothermal vent
Marine- Mud
Marine- Sea water
Marine- Sediment
marine-biofouling material
marine-biofouling-material
Marine-Soil
Marine; marine aquacultures
Marine; marine sponge
Marine; northwest Arabian Gulf
Marine; oil sample
Marine; oil-contaminated soil; Plants; refinery oil sludge; rhizosphere; roots; roots of Kallar Grass; soil; termite nest; water
Marine; Pacific Ocean; PHB film surface suspended in the water; Port Philip Bay; Tasman Sea; the Tasman Sea
Marine; polar sea ice
Marine; Southeastern coastal waters; Southeastern US coastal waters
Marine; southern sea of GeoJe
mats; sediments; springs
Mediterranean Sea
mesophilic biogas processes
metal contaminated soil
metal mine-impacted environments
methane sinks
Mexican brines
microbial community HS01
microbial mats in a hypersaline spring
microbial mats in Antarctic lakes
microbiome of Drosophila
microbiome of Drosophila; Rifle, Colorado
Mid-Atlantic Ridge; Rainbow Hydrothermal Vent System
midgut ant
milk
milking parlor equipment; milking parlor surfaces
mine spoil; soil
mining sites
Mongolian soda lake; Sundarbans mangrove; Sundarbans soils
Monterey Bay seawater
Monterey Bay; Puget Sound
Moolap site
mosquito midgut
mucous membranes
mucous membranes; skin
mud
mud; soil; water
Multiple
municipal tap water; natural water systems; soil
museum s entrance door; window frame
nasal
nasal discharge
nasal discharge; natural spring
nasal; nasal cavity; nasal microbiome; nasopharyngeal; nasopharynx; upper respiratory tract; URT
nasal; nasal cavity; nasal microbiomes; skin
nasopharynx; NP; upper respiratory tract
nasopharynx; upper respiratory tract
native Korean plants
natural and hospital environments
natural environment; sewage
natural nectar; rhizosphere soil; spoilage nectar
natural spring
Nelly Bay Magnetic Island, Australia
neonatal intensive care units (NICUs); pork meat; skin; skin surface of the foot
New Zealand pasture soil
nitrogen fixing nodules of the legumes Pisum sativum
nodule tissues
nodules of Chamaecytisus albus; rhizosphere; root nodules
nonsurface sterilized leaves
Normal microflora- Soil
north slope of Mount Everest
Northeastern Chinese soybean paste; Tree barks in Thailand
northwest Arabian Gulf
Norwegian fjord
nose/throat; oral cavity
offshore oil well
oil sample
oil sludge
oil-polluted water
oily-desert soil of Kuwait; soil
olive mill waste
open Atlantic waters
oral cavity
oral cavity; oral ecosystem
oral cavity; peri-implant sulci
oral cavity; subgingival plaque
oral cavity; submucosal sulcus
oral cavity; SUPP
oral; subgingival plaque
oropharynx; skin
oropharynx; upper respiratory tract
outflow channel of Dragon Spring (DS), Norris Geyser Basin, in Yellowstone National Park (YNP), WY; YNP geothermal feature
Pacific Clarion-Clipperton Fracture Zone
paddy field soil; paddy soil
Pandan Reservoir
Pasteurized milk
Pasture soil
Pasture soil; soil
Patagonian continental shelf
PBS films
PBSA
peat bog
peat swamp forest soil
periodontal plaque biofilms
permafrost
Permamem membranes; supramucosal niche
petrol contaminated soil
petroleum-contaminated soil
petroleum-contaminated soil; petroleum-contaminated soil environments
petroleum-contaminated soil; petroleum-contaminated soils
Pettaquamscutt Estuary, Rhode Island, America (Marine environment)
Peyer s patches
PHB film surface suspended in the water
PHB positioned under gravel
phycosphere of the cyanobacterium
phyllosphere
piglet gut
pit mud
pit mud; silage
plant rhizosphere; plant roots; soil; soils
plant rhizospheres
plant rhizospheric; rhizospheric
plant root surfaces
plant roots
plant roots; rhizosphere; soil; soil rhizosphere
plant roots; soil; wastes from rubber processing facilities
plant soils
plant tissue; soil
plant tissues; terrestrial/aquatic environments
plants
plants; soil; water
plastic pieces under gravel; skin
Poderosa mine; wall moonmilk
pollen of kiwi fruit
polymer suspended in the water
polymetallic mine
pond
Ponds
Populus deltoids rhizosphere
Populus root and rhizosphere microbial communities
pork meat
potatoes
production sites
protist cell
pyramids; stone
pyramids; stone buildings
quartz rock in Antarctica
rainwater
Rambla Salada
rat caecum
raw milk
ready-to-eat foods; soil; undisturbed soil; virgin soil
Red Sea
redox-stratified water columns
residential soil samples; soil
resina
rhizomes
rhizosphere
Rhizosphere of Arugula; soil
rhizosphere of common reeds
rhizosphere of soybean
rhizosphere of sugar cane
rhizosphere of wild grasses of hypersaline soil of the Rann of Kutch, Gujarat, India; Salterns of the Rann of Kutch, Gujarat, India
rhizosphere soil
rhizosphere soil; tuberous roots
rhizosphere; rhizosphere of wheat
rhizosphere; rhizosphere soil; soil; wheat rhizosphere
rhizosphere; rhizospheres
rhizosphere; rhizospheric soil
rhizosphere; soil
rhizospheres
rhizospheric
rhizospheric region of mangroves
rhizospheric soil
riboflavin-rich soil
rice paddy
rice rhizosphere
Rimac river
Rio Tinto
River Tiber; Tiber River
rock salt
rock surfaces
rock surfaces; sea-salt pans
rock varnish in deserts
root canal
root canals
root canals of teeth
Root nodule
root nodules
Root of Arabidopsis thaliana
root; soil
roots
roots; soil
rumen
rumen fluid
rumen; rumen fluid
rumen; soil
rumen; Sundarbans mangrove
ruminal microbiomes
saline environments
saline habitats
saline lake cyanobacterial mats; sea ice
saline land soil
saline land soil; saline soil; soil
saline pond
saline pools in Death Valley
saline soil ecosystems
saline soil environments
saline soil; SS2
Saline water
Salinewater- Soil
saliva
salt lake
sand of Elephant Beach, Havelock Island
sand sediment
sand; sand microcosms
sandy and marine soils
sandy intertidal sediments
sandy loam (Cambisol) soil
Sb-contaminated sites
SC surfaces
seafood
seafood; seafood products
Searles Lake
seawater; sludge; soil; water
Sediment
sediment from a seaside wetland
sediment of a hot spring
sediment of a hypersaline lake located in Laguna Vilama, Argentina
sediment of the river Elbe
sediment samples; sediments of lake Chiemsee
sediment; water; Zipaquira salt mine
sediments; soil
sediments; Southern Ocean
sewage
Sewage sludge
sewage treatment plant
sewage; soil
shallow sea sediment
Shark Bay
shower; washbasin drains; wastewater drainage
showerheads
shrimp production pond
skin
Sludge
sludge of a tannery wastewater reactor
sludge of an anaerobic bioreactor treating paper mill wastewater
soft acid-curd artisan Turkish cheeses
Soil
Soil - Wastewater
soil ecosystems
soil environments
soil of a corn crop field
Soil sample
soil; soil environment
soil; soils
soil; terrestrial soil
soil; vegetables
soil; volcanic soil
soil; wastes from rubber processing facilities
soil; water
soils
solar saltern
solar salterns
Sopapey waters
sourdough
sourdough; Thai fruit
sourdoughs
South China Sea sediment
soybean fields
soybean stem
Specialized
Spitsbergen island (Arctic)
spoilage nectar
spoiled meat
sponge
SS2
stadium seat
steak tartare
steak tartare; vacuum-packaged meats
stem surface of rice
stool
subgingival plaque
submucosal sulcus
submucosal sulcus; vaginal mucosa
subsurface environments
subterranean saline lake
Sundarbans Forest; Sundarbans mangrove
Sundarbans mangrove
Sundarbans mangrove forest
supragingival dental plaque
supramucosal niche
surface hypersaline waters of Lake Tyrrell, Australia
surface of three different kinds of seaweeds
SWs
Tasman Sea
Terrestrial
terrestrial cave wall
terrestrial deep subsurface water
terrestrial ecosystems; terrestrial environments; waste stabilization pond; wetland
terrestrial hot spring
terrestrial; terrestrial environment; terrestrial environments; terrestrial sample
Thai fish sauce; Thai fish sauce fermentation
the environment
The saline mud of the hypersaline lake
Tokyo Bay water
tomato seeds
tongue dorsum
tonsillar crypts
tooth
treated water
Tree barks in Thailand
tropical ascidian
tropical hot spring
trunk surface of a Japanese beech tree
turbot rearing facility
TV samples
underground Soudan iron mine
uraniferous soil; uraniferous SRS soils
uranium rich soil; uranium rich sub-surface soil
uranium-enriched environments
urethral catheter biofilms; urinary tract
urine
urine samples
uterine cervix; vagina
uterus; vaginal; vaginal environment; vaginal space
vagina
vaginal mucosa
vaginal samples
vegetable storages
vegetation
vent
vent fluid; white microbial mat
vertisol soil
volcanic soil
wall sinters
warm arid soils
Washington, USA
wastewater
Wastewater- Aquatic- Soil
water kefir
Water of the hypersaline lake
water poultry farms
well water
western Canadian oil fields
xylem
Zavarzin Spring
Zipaquira salt mine
Biotic Relationship
All biotic relationships
associative symbioses
endophytes
endosymbionts
Free living
Free-living
Free-living; nitrogen-fixing symbiosis
mutualistic symbioses
skin microsymbionts
sponge symbiont
symbiont
symbionts
Symbiotic
Host
All hosts
Homo sapiens
Gallus gallus
Bos taurus
Trachinotus ovatus
Oreochromis niloticus
Paralichthys olivaceus
Oncorhynchus mykiss
Pagrus pagrus
Trachinotus blochii
Bos
Siphonaptera
Metazoa
Gossypium hirsutum
Lutjanus russellii
Viridiplantae
Triticum aestivum
Lolium multiflorum
Sparus aurata
Danio rerio
Brassica oleracea var. capitata
Vicia faba
Camelus dromedarius
Solanum tuberosum
Solanum lycopersicum
Oryza sativa
Arabidopsis
Anser sp.
Lucilia sericata
Hordeum vulgare
Secale cereale
Ovis aries
Phasianidae
Sus scrofa
Chlamydomonas reinhardtii
Chlorella vulgaris
Scenedesmus sp.
Botryococcus braunii
Chlorophyta
Ornithodoros hermsi
Argasidae
Ornithodoros turicata
Peromyscus leucopus
Lablab purpureus
Parasponia andersonii
Lotus japonicus
Insecta
Ixodida
Termitoidae
Culex pipiens pallens
Aedes albopictus
Aedes aegypti
Tenebrio molitor
Tenebrio
Actinidia deliciosa
Daucus carota
Cenchrus americanus
Serendipita indica
Miscanthus
Oryctolagus cuniculus
Pancrustacea
Ruditapes philippinarum
Keenocardium californiense
catfish
Petrachloros mirabilis
Tilapia
Rasbora argyrotaenia
Escherichia coli
Aquaspirillum serpens
Acacia saligna
Leucaena leucocephala
Medicago truncatula
Phaseolus vulgaris
Oryza sativa Indica Group
Aves
Aeromonas hydrophila
Vibrio alginolyticus
Vibrio parahaemolyticus
Edwardsiella tarda
Cicer arietinum
Astragalus pelecinus
Glycine max
Vicia
Lathyrus
Lens culinaris
Biserrula
Indigofera sp.
Phaseolus
Acacia
Glycine
Medicago
Melilotus
Trigonella
Trifolium ambiguum
Ornithopus
Lupinus
Stylosanthes hamata
Aeschynomene americana
Capsicum frutescens
Solanum melongena
Galleria mellonella
Canis lupus familiaris
Felis catus
Primates
Ictalurus punctatus
Pangasianodon hypophthalmus
Lates calcarifer
Trichopodus pectoralis
Ictaluridae
Salmonidae
Bivalvia
Seriola quinqueradiata
gut metagenome
Reticulitermes speratus
Anser
Zea mays subsp. mays
Brachiaria
Macaca mulatta
Macaca fascicularis
Salmonella enterica
Salmonella enterica subsp. enterica serovar Infantis
Salmonella
Zophobas morio
Zophobas atratus
Vavilovia formosa
Vavilovia
Medicago sativa
Oreochromis sp.
Acipenser baerii
Acipenser sinensis
Pterois volitans
Anguilla anguilla
Mollusca
Mammalia
Amphibia
Psidium guajava
Galatea paradoxa
Glycyrrhiza uralensis
Papaver somniferum
Justicia adhatoda
Mentha arvensis
Withania somnifera
Catharanthus roseus
Plectranthus barbatus
Phocidae
Equus caballus
Hippocampus abdominalis
Hippocampinae
Sebastes schlegelii
Penaeus vannamei
Hippocampus erectus
Ipomoea batatas
Carnivora
Holothuroidea
Ostreidae
Aporrectodea sp.
Metaphire sieboldi
Cromileptes altivelis
Scophthalmus maximus
Ctenopharyngodon idella
Anabas testudineus
Lathyrus oleraceus
Acanthamoeba castellanii
Amoeba
Vicia cracca
Cavia
Rubus sp.
Vitis sp.
Ficus benjamina
Mangifera indica
Pinus sylvestris
Acropora millepora
Artemia sp.
Magallana gigas
Actinidia chinensis
Actinidia
Trifolium pratense
Vicia sativa
Pteropodidae
Lepus
Meriones unguiculatus
Rousettus leschenaultii
Chiroptera
Capra hircus
Trichonympha agilis
Trichonympha
Raphanus sativus
Trifolium rubens
Saccharum officinarum
Zea mays
Eruca vesicaria subsp. sativa
Meleagris gallopavo
Cyprinus carpio
Anas
Nematoda
Acropora nasuta
Arachis hypogaea
Zingiber officinale
Geranium
Solanum chacoense
Solanum albicans
Solanum stoloniferum
Solanaceae
Citrus
Nicotiana tabacum
Rodentia
Alvinocaris longirostris
Mola mola
Equidae
Salmo salar
Gastrotheca
Gastrotheca riobambae
Anura
Aeschynomene
Neptunia
Sesbania
Neophocaena asiaeorientalis asiaeorientalis
Chrysophyllum oliviforme
Trifolium repens
Pelodryas caerulea
Xenopus laevis
Theloderma corticale
Ambystoma tigrinum
Triturus pygmaeus
Phyllobates terribilis
Cynops pyrrhogaster
Kurixalus bisacculus
Oophaga histrionica
Bombina bombina
Bombina variegata
Cucumis sativus
Brachypodium distachyon
Capsicum annuum
Tracheophyta
Gambeya albida
Campeiostachys nutans
Allium cepa
Scomber australasicus
Eleusine coracana
Diospyros kaki
Panax ginseng
Piaractus mesopotamicus
Anabas
Cricetinae
Thais
Liliopsida
eudicotyledons
Brassica oleracea var. botrytis
Nasturtium officinale
Capsella bursa-pastoris
Fragaria x ananassa
Raphanus sativus var. niger
Arabidopsis thaliana
Prunus persica
Citrus x paradisi
Callosobruchus maculatus
Glyptocephalus stelleri
Ixodes scapularis
Acanthamoeba
Choanoflagellata
Salvelinus alpinus
Haematobia irritans exigua
Panulirus ornatus
Artemia
Nephropidae
Tegillarca granosa
Salsola australis
Bassia prostrata
Sedobassia sedoides
Ulva lactuca
Oscheius
Rhomborhabditis regina
Drosophila melanogaster
Vertebrata
Trichoplusia ni
Lepidoptera
Diptera
Coleoptera
Olea europaea
Cavia porcellus
Apinae
Apis mellifera
Musca domestica
Malus domestica
Apis mellifera intermissa
Plutella xylostella
Theobroma cacao
Chelidonium majus
Fagonia indica
Lolium perenne
Urtica dioica
Spodoptera frugiperda
Spodoptera litura
Manduca sexta
Peridroma saucia
Bombyx mori
Heliothis virescens
Hyles euphorbiae
Helicoverpa armigera
Spodoptera littoralis
Coturnix japonica
Citrus x limon
Caprinae
Phoenix dactylifera
Euphorbia prostrata
Oxalis corniculata
Scrophularia striata
Paspalum vaginatum
Pseudostellaria heterophylla
Coffea canephora
Vitis vinifera
Viburnum grandiflorum
Nerodia rhombifer
Cetacea
Anatidae
Anas platyrhynchos
Phocoenidae
Cervus elaphus
Python regius
Iguana iguana
Corallus batesii
Ficus
Brassica rapa subsp. rapa
Beta vulgaris
Oryza sativa Japonica Group
Bison bonasus
Anthophila
Pastinaca sativa
Pinus sp.
Apodemus agrarius
Marmota vancouverensis
Alouatta caraya
Erythrocebus patas
Dasyprocta leporina
Mus musculus
Muridae
Acipenser sturio
Thalassiosira pseudonana
Prochlorococcus
Isochrysis galbana
Odocoileus virginianus
White tip die-back phytoplasma
Cervidae
Hirudo verbana
Callitrichinae sp.
Mesocricetus auratus
Brugia malayi
Onchocerca ochengi
Tribolium castaneum
Papio
Panthera pardus
Panthera leo
Suricata suricatta
Connochaetes gnou
Tragelaphus angasii
Chlorocebus pygerythrus
Olea
Mimosa
Rhizopus microsporus
Fungi
Piptadenia
Calliandra
Vigna unguiculata
Macroptilium atropurpureum
Dipogon lignosus
Mimosa pudica
Morone saxatilis
Anguillidae
Oreochromis mossambicus
Anabantidae
Characidae
Cyprinidae
Cladocera
Oryzias latipes
Tipula abdominalis
Testudines
Serpentes
Arthropoda
Suidae
Amygdaloideae
Struthio camelus
Paris
Dasypodidae
Pyrus
Pyrus communis
Culex quinquefasciatus
Huso huso
Ovis canadensis
Ovis canadensis canadensis
Ovis dalli
Ovis dalli dalli
Oreamnos americanus
Ovis canadensis nelsoni
Ovibos moschatus
Rangifer tarandus
Odocoileus hemionus
Cenchrus purpureus
Ixodes persulcatus
Cucumis melo
Casuarius casuarius
Casuariidae
Steinernema
Steinernema litorale
Punica granatum
Seriola lalandi
Cubitermes speciosus
Steinernema riobrave
Steinernema serratum
Haliotis corrugata
Mytilus coruscus
Helianthus
Prunus
Prunus avium
Citrullus lanatus
Rattus norvegicus
Brassica napus var. napus
Hipposideros larvatus
Beta vulgaris subsp. vulgaris
Cynara cardunculus var. scolymus
Cichorium intybus
Bacillariophyta
Allium sativum
Dermacentor reticulatus
Ixodidae
Haemaphysalis concinna
Boidae
Colubridae
Elapidae
Pythonidae
Viperidae
Testudinidae
Crocodylia
Acrantophis dumerili
Boa constrictor constrictor
Corallus caninus
Dispholidus typus
Naja haje
Naja kaouthia
Naja naja
Naja nivea
Antaresia maculosa
Malayopython reticulatus
Morelia spilota
Morelia viridis
Trimeresurus venustus
Python
Chionoecetes japonicus
Vannella
Korotnevella
Ciliophora
Amoebozoa
Cyclidium
Echinamoeba
Naegleria
Tetrahymena
Vermamoeba
Haemaphysalis juxtakochi
Amblyomma yucumense
Amblyomma romarioi
Caenorhabditis elegans
Ocimum basilicum
Chrysanthemum
Pelargonium x hortorum
Lissotriton vulgaris
Naemorhedus caudatus
Ophiostoma piceae
Alca torda
Brassica oleracea var. italica
Brassica oleracea var. viridis
Brassicaceae
Mitragyna speciosa
Clinacanthus siamensis
Artemisia annua
Portulaca oleracea
Drymaria cordata
Myocastor coypus
Heterorhabditis sp.
Rhipicephalus sanguineus
Anopheles stephensi
Anopheles albimanus
Anopheles darlingi
Anopheles sp.
Silurus glanis
Agaricus bisporus
Holothuria leucospilota
Lynx rufus
Nicotiana occidentalis
Plethodon cinereus
Capsicum chinense
Vigna
Ilex opaca
Tulipa
Euphorbia pulcherrima
Alnus alnobetula
Casuarina equisetifolia
Coriaria myrtifolia
Elaeagnus x submacrophylla
Hippophae rhamnoides
Myrica gale
Morella pensylvanica
Lupinus angustifolius
Lupinus gredensis
Alnus
Elaeagnus
Hippophae
Myrica
Morella
Coriaria
Ochetophila trinervis
Medicago sp.
Heterorhabditis
Heterorhabditis bacteriophora
Macaca
root
Polypogon monspeliensis
Populus euphratica
Steinernema sp.
Steinernema kushidai
Sciuromorpha
Picea abies
Echidna
Craugastor crassidigitus
Fabaceae
Poaceae
Fraxinus excelsior
Ixodes ricinus
Phocoena phocoena
Modiolus modiolus
Mycale grandis
Acartia tonsa
Avena sativa
Cucumis
Solanum rostratum
Solanum sarrachoides
salmonid fish
Caniformia
Pygoscelis adeliae
Columbidae
Euprymna scolopes
Sepioteuthis lessoniana
Groenlandia densa
Diplachne fusca
Ficus religiosa
Gopherus agassizii
Gopherus morafkai
Gopherus polyphemus
Apodemus flavicollis
Lipoptena cervi
Melophagus ovinus
Microtus arvalis
Myodes glareolus
Clethrionomys gapperi
Apodemus speciosus
Rattus leucopus
Apodemus argenteus
Bandicota indica
Craseomys rufocanus
Heterorhabditidae
Corchorus olitorius
Hypericum perforatum
Ziziphora capitata
Gerbillinae
Phascolarctidae
Salvia rosmarinus
Diaphorina citri
Opuntia stricta
Shiraia
Costelytra giveni
Pyronota
Prunus domestica
Nerium oleander
Retama sphaerocarpa
Lates niloticus
Corylus avellana
Brassica napus
Elymus repens
Viola arvensis
Stellaria media
Solanum acaule
Mallotus japonicus
Loropetalum chinense
Prunus dulcis
Epinephelus fuscoguttatus x Epinephelus lanceolatus
Epinephelus fuscoguttatus
Epinephelus lanceolatus
Tursiops truncatus
Balamuthia mandrillaris
Dictyostelium discoideum
Cucurbita maxima
Elaphurus davidianus
Amphipoda
Reticulitermes santonensis
Lontra canadensis
Dianthus caryophyllus
Hoplobatrachus rugulosus
Rana muscosa
Pelophylax ridibundus
Rawlinsonia ewingii
Camellia reticulata
Bugula neritina
Bryozoa
Tunicata
Nicotiana benthamiana
Tridacna crocea
Crassostrea virginica
Ostrea edulis
Pecten maximus
Argopecten irradians
Perna canaliculus
Zantedeschia aethiopica
Cajanus cajan
Sorghum bicolor
Montipora capitata
Coffea arabica
Coffea
Amphicarpaea bracteata
Populus x canadensis
Lama glama
Crinum macowanii
Retama monosperma
Retama
Lupinus luteus
Bathymodiolus heckerae
Sepiida
Symbiodiniaceae
Euphausia superba
Anguilla japonica
Sargassum wightii
Cannabis
Loris tardigradus nordicus
Okapia johnstoni
Hydrolagus purpurescens
Rhododendron
Cynodon dactylon
Acromyrmex octospinosus
Craniella australiensis
Topsentia rugosa
Stelletta tenuis
Hymeniacidon perlevis
Aplysia dactylomela
Gracilariopsis longissima
Gymnogongrus flabelliformis
Fushitsunagia catenata
Saccharina japonica
Ulva fasciata
Ulva pertusa
Sargassum thunbergii
Attini
Formicidae
Mycocepurus smithii
Trachymyrmex septentrionalis
Atta
Acromyrmex
Cyphomyrmex
Trachymyrmex
Mycetomoellerius zeteki
Anemone
Chinchilla
Acanthamoeba sp.
Aeschynomene indica
Allium
Tagetes
Dinophyceae
Delisea pulchra
Ornithopus pinnatus
Lupinus sp.
Niphotrichum japonicum
Parasponia
Brassica rapa subsp. pekinensis
Amblyomma variegatum
Tachyglossus aculeatus
Pelecanidae
Acanthamoeba polyphaga
Halichondria panicea
Haliclona simulans
Paridae
Periparus ater
Cyanistes caeruleus
Parus major
Gekko
Galago
Lynx lynx
Setaria viridis
Medicago lupulina
Lotus corniculatus
Salicornia rubra
Salicornia utahensis
Allenrolfea occidentalis
Acacia confusa
Eunicella labiata
Porifera
Canis lupus
Procyon lotor
Erinaceidae
Equus asinus
Manihot esculenta
Bombus terrestris
Lutzomyia longipalpis
Anopheles gambiae
Dermacentor andersoni
Coryphaenoides yaquinae
Lemna
Gadus morhua
Lilium davidii var. unicolor
Penaeus monodon
Zalophus californianus
Halictus sp.
Megachile sp.
Xylocopa violacea
Bombus sp.
Osmia bicornis
Teredinidae
Lyrodus pedicellatus
Pediculus humanus
Sideroxylon spinosum
Rachycentron canadum
Flammulina velutipes
Cryptotermes brevis
Isoodon obesulus
Bettongia lesueur
Dasyurus viverrinus
Burramys parvus
Dasyurus hallucatus
Cephalophus silvicultor
Micropterus salmoides
Phthiraptera
Erigeron annuus
Megalobrama amblycephala
Thecaphora
Leptonotus elevatus
Thunnus albacares
Melilotus albus
Camponotus japonicus
Tetraponera penzigi
Bos grunniens
Ulva
Astragalus membranaceus
Porites sp.
Camellia sinensis
Camellia oleifera
Apodemus sylvaticus
Pyrus pyrifolia
Populus
Trifolium polymorphum
Sitophilus oryzae
Cinara cedri
Cinara tujafilina
Cimex lectularius
Pellioditis hermaphrodita
Trifolium subterraneum
Ondatra zibethicus
Wisteria
Papilionoideae
Mycale laxissima
Ceratotherium simum
Quercus robur
Astragalus sinicus
Trifolium pallidum
Crambe crambe
Euplotes raikovi
Azolla
Azolla filiculoides
Steinernema khoisanae
Emiliania huxleyi
Pocillopora damicornis
Morella rubra
Skeletonema costatum
Listia bainesii
Crotalaria trichotoma
Rosaceae
Dactylopius coccus
Dactylopius opuntiae
Dactylopius
Hymenochaete rubiginosa
Dicentrarchus labrax
Genypterus chilensis
Laridae
Haliaeetus leucocephalus
Callithrix jacchus
Acyrthosiphon pisum
Halocynthia roretzi
Sesbania cannabina
Ixodes pacificus
Blasia pusilla
Larimichthys crocea
Anopheles pharoensis
Anopheles arabiensis
Haemaphysalis
Dermacentor
Ixodes
Lasius niger
Vachellia pachyceras
Montipora aequituberculata
Ictalurus furcatus
Euprymna morsei
Euprymna tasmanica
Monocentris japonica
Coelorinchus multispinulosus
Doryteuthis pealeii
Cetraria sp.
Dicoma anomala
Artemisia vulgaris
Perilla frutescens
Ecklonia
Avena strigosa
Dicathais orbita
Tedania sp.
Callyspongia sp.
Spheciospongia vagabunda
Styela canopus
Athletes
Cydonia oblonga
Prunus incisa
Prorocentrum lima
Persea americana
Lotus burttii
Colocasia esculenta
Allium sp.
Orchidaceae
Apostichopus japonicus
Erythrina brucei
Coriariaceae
Datiscaceae
Dryadoideae
Ceanothus
Glossina
Dracaena trifasciata
Dracaena pethera
Bubalus bubalis
Riptortus pedestris
Sesbania rostrata
Sophora flavescens
Microtus ochrogaster
Sophora alopecuroides
Aspalathus sp.
Sulla
Medicago ruthenica
Aloe vera
Orychophragmus violaceus
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Bacmap ID
Organism Name
Phylum
Class
Order
Family
Bac0000201
Agrobacterium tumefaciens
Pseudomonadota
Alphaproteobacteria
Hyphomicrobiales
Rhizobiaceae
Bac0000202
Agrobacterium tumefaciens str. 186
Pseudomonadota
Alphaproteobacteria
Hyphomicrobiales
Rhizobiaceae
Bac0000203
Agrobacterium tumefaciens str. A6
Pseudomonadota
Alphaproteobacteria
Hyphomicrobiales
Rhizobiaceae
Bac0000204
Agrobacterium rhizogenes str. NCPPB2659
Pseudomonadota
Alphaproteobacteria
Hyphomicrobiales
Rhizobiaceae
Bac0000205
Agrobacterium rhizogenes str. TPD7009
Pseudomonadota
Alphaproteobacteria
Hyphomicrobiales
Rhizobiaceae
Bac0000206
Agrobacterium rhizogenes str. ATCC 15834
Pseudomonadota
Alphaproteobacteria
Hyphomicrobiales
Rhizobiaceae
Bac0000207
Agrobacterium sp.
Pseudomonadota
Alphaproteobacteria
Hyphomicrobiales
Rhizobiaceae
Bac0000208
Bradyrhizobium sp.
Pseudomonadota
Alphaproteobacteria
Hyphomicrobiales
Nitrobacteraceae
Bac0000209
Sinorhizobium fredii str. NXT3
Pseudomonadota
Alphaproteobacteria
Hyphomicrobiales
Rhizobiaceae
Bac0000210
Mesorhizobium loti str. DSM 2626
Pseudomonadota
Alphaproteobacteria
Hyphomicrobiales
Phyllobacteriaceae
Bac0000211
Mesorhizobium loti str. NZP2042
Pseudomonadota
Alphaproteobacteria
Hyphomicrobiales
Phyllobacteriaceae
Bac0000212
Sinorhizobium meliloti str. AC50a
Pseudomonadota
Alphaproteobacteria
Hyphomicrobiales
Rhizobiaceae
Bac0000213
Sinorhizobium meliloti
Pseudomonadota
Alphaproteobacteria
Hyphomicrobiales
Rhizobiaceae
Bac0000214
Rhizobium leguminosarum
Pseudomonadota
Alphaproteobacteria
Hyphomicrobiales
Rhizobiaceae
Bac0000215
Rhizobium ruizarguesonis
Pseudomonadota
Alphaproteobacteria
Hyphomicrobiales
Rhizobiaceae
Bac0000216
Rhizobium sp. WSM1325
Pseudomonadota
Alphaproteobacteria
Hyphomicrobiales
Rhizobiaceae
Bac0000217
Rhizobium leguminosarum str. ATCC 14479
Pseudomonadota
Alphaproteobacteria
Hyphomicrobiales
Rhizobiaceae
Bac0000218
Rhizobium leguminosarum str. Norway
Pseudomonadota
Alphaproteobacteria
Hyphomicrobiales
Rhizobiaceae
Bac0000219
Rhizobium leguminosarum bv. viciae str. UPM791
Pseudomonadota
Alphaproteobacteria
Hyphomicrobiales
Rhizobiaceae
Bac0000220
Rhizobium leguminosarum bv. viciae
Pseudomonadota
Alphaproteobacteria
Hyphomicrobiales
Rhizobiaceae
Bac0000221
Rhizobium sp.
Pseudomonadota
Alphaproteobacteria
Hyphomicrobiales
Rhizobiaceae
Bac0000222
Sinorhizobium fredii NGR234
Pseudomonadota
Alphaproteobacteria
Hyphomicrobiales
Rhizobiaceae
Bac0000223
Rhizobium phaseoli
Pseudomonadota
Alphaproteobacteria
Hyphomicrobiales
Rhizobiaceae
Bac0000224
Martinezella tropici
Pseudomonadota
Alphaproteobacteria
Hyphomicrobiales
Rhizobiaceae
Bac0000225
Methylobacterium sp.
Pseudomonadota
Alphaproteobacteria
Hyphomicrobiales
Methylobacteriaceae
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