Kingdom
Bacillati
Phylum
Actinomycetota
Class
Rubrobacteria
Order
Rubrobacterales
Family
Rubrobacteraceae
Genus
Rubrobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Rubrobacteria |
| Order | Rubrobacterales |
| Family | Rubrobacteraceae |
| Genus | Rubrobacter |
| Species | Rubrobacter xylanophilus |
| Strain | PRD-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rubrobacter xylanophilus PRD-1
Accession NumberCP073779.1
Gene Summary
Adenine Count
488973 bp
Thymine Count
493569 bp
Guanine Count
1071447 bp
Cytosine Count
1071596 bp
Genome Length
3127021 bp
Protein-coding Genes
3145 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| thiamine-phosphate synthase | Rxycam_01210 | P61411 | + | 1159649 - 1160407 | 26525.8 |
| thiazole synthase | Rxycam_01211 | Q1IX18 | + | 1160370 - 1161296 | 33050.7 |
| 2-haloacrylate reductase | Rxycam_01212 | P43903 | - | 1161310 - 1162293 | 34849.8 |
| acetyl-coa:oxalate coa-transferase | Rxycam_01213 | Q9HAC7 | + | 1162383 - 1163504 | 39627.2 |
| 2-methylisocitrate lyase | Rxycam_01214 | P77541 | + | 1163597 - 1164496 | 32465.7 |
| 2-methylcitrate synthase | Rxycam_01215 | P31660 | + | 1164497 - 1165612 | 41651.3 |
| citrate/2-methylcitrate dehydratase | Rxycam_01216 | P45859 | + | 1165613 - 1167025 | 51936.9 |
| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha | Rxycam_01217 | P27745 | + | 1167113 - 1168108 | 35378.7 |
| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta | Rxycam_01218 | P27746 | + | 1168139 - 1169158 | 36509.4 |
| dihydrolipoyllysine-residue acetyltransferase component of acetoin cleaving system | Rxycam_01219 | Q59695 | + | 1169174 - 1170286 | 39438.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.