Kingdom
Bacillati
Phylum
Actinomycetota
Class
Rubrobacteria
Order
Rubrobacterales
Family
Rubrobacteraceae
Genus
Rubrobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Rubrobacteria |
| Order | Rubrobacterales |
| Family | Rubrobacteraceae |
| Genus | Rubrobacter |
| Species | Rubrobacter xylanophilus |
| Strain | PRD-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rubrobacter xylanophilus PRD-1
Accession NumberCP073779.1
Gene Summary
Adenine Count
488973 bp
Thymine Count
493569 bp
Guanine Count
1071447 bp
Cytosine Count
1071596 bp
Genome Length
3127021 bp
Protein-coding Genes
3145 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ubiquinone/menaquinone biosynthesis c-methyltransferase ubie | Rxycam_00921 | Q24W96 | - | 889393 - 890130 | 26480.0 |
| hypothetical protein | Rxycam_00922 | Not Available | - | 890127 - 890567 | 15429.2 |
| glutamate-1-semialdehyde 2,1-aminomutase | Rxycam_00923 | Q1AUK6 | - | 890543 - 891862 | 46803.8 |
| delta-aminolevulinic acid dehydratase | Rxycam_00924 | P43087 | - | 891885 - 892844 | 34607.2 |
| siroheme synthase | Rxycam_00925 | Q59294 | - | 892874 - 894409 | 54610.7 |
| porphobilinogen deaminase | Rxycam_00926 | Q1AUK3 | - | 894406 - 895323 | 32749.7 |
| glutamyl-trna reductase | Rxycam_00927 | Q1AUK2 | - | 895323 - 896612 | 47181.8 |
| siroheme synthase | Rxycam_00928 | Q0AHC1 | - | 896588 - 897172 | 21086.3 |
| cyclic pyranopterin monophosphate synthase 2 | Rxycam_00929 | Q82H75 | - | 897257 - 897712 | 16164.7 |
| Trna-sec(p) | Not Available | Not Available | + | 897777 - 897865 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.