Kingdom
Bacillati
Phylum
Actinomycetota
Class
Rubrobacteria
Order
Rubrobacterales
Family
Rubrobacteraceae
Genus
Rubrobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Rubrobacteria |
| Order | Rubrobacterales |
| Family | Rubrobacteraceae |
| Genus | Rubrobacter |
| Species | Rubrobacter xylanophilus |
| Strain | PRD-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rubrobacter xylanophilus PRD-1
Accession NumberCP073779.1
Gene Summary
Adenine Count
488973 bp
Thymine Count
493569 bp
Guanine Count
1071447 bp
Cytosine Count
1071596 bp
Genome Length
3127021 bp
Protein-coding Genes
3145 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| autoinducer 2-binding protein lsrb | Rxycam_00761 | A4WER1 | - | 723001 - 724035 | 36801.0 |
| autoinducer 2 import system permease protein lsrd | Rxycam_00762 | P36948 | - | 724061 - 725029 | 33628.9 |
| ribose import permease protein rbsc | Rxycam_00763 | P0AGI3 | - | 725026 - 726015 | 33058.7 |
| ribose import atp-binding protein rbsa | Rxycam_00764 | Q1AVD3 | - | 726012 - 727571 | 55877.5 |
| rhamnulokinase | Rxycam_00765 | Q8A1A3 | - | 727572 - 729071 | 54851.5 |
| hypothetical protein | Rxycam_00766 | Not Available | - | 729068 - 729442 | 13707.3 |
| lactose phosphotransferase system repressor | Rxycam_00767 | O05261 | - | 729435 - 730244 | 29630.9 |
| hypothetical protein | Rxycam_00768 | Q82PP4 | - | 730365 - 733382 | 111627.0 |
| hypothetical protein | Rxycam_00769 | Not Available | - | 733370 - 733525 | 5610.79 |
| alpha-l-rhamnosidase | Rxycam_00770 | Q82PP4 | - | 733531 - 736788 | 121279.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.