Kingdom
Bacillati
Phylum
Actinomycetota
Class
Rubrobacteria
Order
Rubrobacterales
Family
Rubrobacteraceae
Genus
Rubrobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Rubrobacteria |
| Order | Rubrobacterales |
| Family | Rubrobacteraceae |
| Genus | Rubrobacter |
| Species | Rubrobacter xylanophilus |
| Strain | PRD-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rubrobacter xylanophilus PRD-1
Accession NumberCP073779.1
Gene Summary
Adenine Count
488973 bp
Thymine Count
493569 bp
Guanine Count
1071447 bp
Cytosine Count
1071596 bp
Genome Length
3127021 bp
Protein-coding Genes
3145 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| protocatechuate 3,4-dioxygenase alpha chain | Rxycam_00621 | P20371 | - | 591034 - 591612 | 21429.1 |
| protocatechuate 3,4-dioxygenase beta chain | Rxycam_00622 | P15110 | - | 591624 - 592361 | 28282.4 |
| beta-ketoadipyl-coa thiolase | Rxycam_00623 | Q9I6R0 | - | 592384 - 593658 | 45744.9 |
| 3-oxoadipate coa-transferase subunit b | Rxycam_00624 | Q8VPF2 | - | 593678 - 594454 | 27693.2 |
| 3-oxoadipate coa-transferase subunit a | Rxycam_00625 | Q8VPF3 | - | 594451 - 595311 | 31845.1 |
| hth-type transcriptional regulator benm | Rxycam_00626 | Q04778 | + | 595457 - 596398 | 35220.1 |
| 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase | Rxycam_00627 | P42319 | + | 596422 - 597537 | 41911.5 |
| 3-dehydroquinate dehydratase | Rxycam_00628 | A6W6P9 | + | 597703 - 598149 | 16479.6 |
| hypothetical protein | Rxycam_00629 | Not Available | - | 598473 - 598910 | 15845.9 |
| hypothetical protein | Rxycam_00630 | Not Available | - | 598907 - 599218 | 12555.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.