Kingdom
Bacillati
Phylum
Actinomycetota
Class
Rubrobacteria
Order
Rubrobacterales
Family
Rubrobacteraceae
Genus
Rubrobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Rubrobacteria |
| Order | Rubrobacterales |
| Family | Rubrobacteraceae |
| Genus | Rubrobacter |
| Species | Rubrobacter xylanophilus |
| Strain | PRD-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rubrobacter xylanophilus PRD-1
Accession NumberCP073779.1
Gene Summary
Adenine Count
488973 bp
Thymine Count
493569 bp
Guanine Count
1071447 bp
Cytosine Count
1071596 bp
Genome Length
3127021 bp
Protein-coding Genes
3145 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pyridoxal 4-dehydrogenase | Rxycam_02592 | Q988B7 | + | 2537646 - 2538398 | 26705.9 |
| hypothetical protein | Rxycam_02593 | Not Available | + | 2538398 - 2539522 | 42138.1 |
| hypothetical protein | Rxycam_02594 | Q12BV1 | + | 2539519 - 2540655 | 43600.2 |
| hypothetical protein | Rxycam_02595 | Q8GI16 | + | 2540655 - 2541026 | 14054.0 |
| hypothetical protein | Rxycam_02596 | Not Available | + | 2541031 - 2541267 | 8645.31 |
| galactarate dehydratase (l-threo-forming) | Rxycam_02597 | P42604 | + | 2541311 - 2543977 | 95983.7 |
| alpha-ketoglutaric semialdehyde dehydrogenase | Rxycam_02598 | P42236 | - | 2543987 - 2545444 | 51369.0 |
| hypothetical protein | Rxycam_02599 | D4GP28 | - | 2545475 - 2546317 | 30336.0 |
| hypothetical protein | Rxycam_02600 | Q57544 | + | 2546447 - 2547340 | 32934.4 |
| d-galactonate dehydratase family member rspa | Rxycam_02601 | D4GP40 | + | 2547376 - 2548578 | 44194.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.