Kingdom
Bacillati
Phylum
Actinomycetota
Class
Rubrobacteria
Order
Rubrobacterales
Family
Rubrobacteraceae
Genus
Rubrobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Rubrobacteria |
| Order | Rubrobacterales |
| Family | Rubrobacteraceae |
| Genus | Rubrobacter |
| Species | Rubrobacter xylanophilus |
| Strain | PRD-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rubrobacter xylanophilus PRD-1
Accession NumberCP073779.1
Gene Summary
Adenine Count
488973 bp
Thymine Count
493569 bp
Guanine Count
1071447 bp
Cytosine Count
1071596 bp
Genome Length
3127021 bp
Protein-coding Genes
3145 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 6-hydroxypseudooxynicotine dehydrogenase complex subunit alpha | Rxycam_02442 | O87681 | + | 2395217 - 2396047 | 30001.8 |
| putative xanthine dehydrogenase subunit d | Rxycam_02443 | O32144 | + | 2396040 - 2398250 | 79399.4 |
| nicotinate dehydrogenase subunit a | Rxycam_02444 | Q88FX9 | + | 2398247 - 2398723 | 16853.7 |
| putative protein yisk | Rxycam_02445 | Q9UYW0 | + | 2398720 - 2399556 | 30533.1 |
| hypothetical protein | Rxycam_02446 | A1JJ50 | + | 2399560 - 2399853 | 11306.2 |
| kynurenine formamidase | Rxycam_02447 | Q2S2F5 | + | 2399864 - 2400550 | 24836.5 |
| hypothetical protein | Rxycam_02448 | Not Available | + | 2400556 - 2401275 | 26492.4 |
| hypothetical protein | Rxycam_02449 | P32398 | - | 2401272 - 2401916 | 24352.1 |
| long-chain-fatty-acid--coa ligase | Rxycam_02450 | P94547 | + | 2402050 - 2403660 | 58865.1 |
| short-chain-enoyl-coa hydratase | Rxycam_02451 | P52046 | + | 2403685 - 2404458 | 27193.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.