Kingdom
Bacillati
Phylum
Actinomycetota
Class
Rubrobacteria
Order
Rubrobacterales
Family
Rubrobacteraceae
Genus
Rubrobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Rubrobacteria |
| Order | Rubrobacterales |
| Family | Rubrobacteraceae |
| Genus | Rubrobacter |
| Species | Rubrobacter xylanophilus |
| Strain | PRD-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rubrobacter xylanophilus PRD-1
Accession NumberCP073779.1
Gene Summary
Adenine Count
488973 bp
Thymine Count
493569 bp
Guanine Count
1071447 bp
Cytosine Count
1071596 bp
Genome Length
3127021 bp
Protein-coding Genes
3145 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha | Rxycam_02432 | O31404 | + | 2384390 - 2385352 | 35625.4 |
| 2-oxoisovalerate dehydrogenase subunit beta | Rxycam_02433 | P37941 | + | 2385370 - 2386362 | 34958.8 |
| dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex | Rxycam_02434 | O31550 | + | 2386376 - 2387566 | 42380.9 |
| sorbitol dehydrogenase | Rxycam_02435 | Q06004 | + | 2387582 - 2388652 | 37875.7 |
| kynurenine formamidase | Rxycam_02436 | A0NLY7 | + | 2388657 - 2389469 | 28586.2 |
| long-chain-fatty-acid--coa ligase fadd13 | Rxycam_02437 | Q9EY88 | + | 2389480 - 2391042 | 57456.4 |
| chondramide synthase cmdd | Rxycam_02438 | O34796 | + | 2391249 - 2392982 | 65715.2 |
| putative d-xylose utilization operon transcriptional repressor | Rxycam_02439 | Q8GAL4 | + | 2392979 - 2393620 | 24409.4 |
| kynurenine formamidase | Rxycam_02440 | Q1GTB8 | + | 2393617 - 2394336 | 27187.4 |
| prodigiosin synthesizing transferase pigc | Rxycam_02441 | O29548 | + | 2394336 - 2395217 | 32348.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.