Kingdom
Bacillati
Phylum
Actinomycetota
Class
Rubrobacteria
Order
Rubrobacterales
Family
Rubrobacteraceae
Genus
Rubrobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Rubrobacteria |
| Order | Rubrobacterales |
| Family | Rubrobacteraceae |
| Genus | Rubrobacter |
| Species | Rubrobacter xylanophilus |
| Strain | PRD-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rubrobacter xylanophilus PRD-1
Accession NumberCP073779.1
Gene Summary
Adenine Count
488973 bp
Thymine Count
493569 bp
Guanine Count
1071447 bp
Cytosine Count
1071596 bp
Genome Length
3127021 bp
Protein-coding Genes
3145 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| na(+)-translocating nadh-quinone reductase subunit f | Rxycam_02251 | Q255Y6 | + | 2179038 - 2179406 | 13477.3 |
| syringate o-demethylase | Rxycam_02252 | G2IJ05 | + | 2179562 - 2180953 | 51887.9 |
| hypothetical protein | Rxycam_02253 | Q8YC99 | + | 2180980 - 2182227 | 44340.9 |
| high-affinity branched-chain amino acid transport system permease protein livh | Rxycam_02254 | P21627 | + | 2182247 - 2183116 | 30209.7 |
| hypothetical protein | Rxycam_02255 | P21628 | + | 2183113 - 2184135 | 36372.2 |
| lipopolysaccharide export system atp-binding protein lptb | Rxycam_02256 | P21629 | + | 2184132 - 2184887 | 27736.4 |
| high-affinity branched-chain amino acid transport atp-binding protein livf | Rxycam_02257 | P21630 | + | 2184880 - 2185584 | 25309.8 |
| hypothetical protein | Rxycam_02258 | P21336 | - | 2185581 - 2186360 | 27128.5 |
| manganese-dependent 2,3-dihydroxybiphenyl 1,2-dioxygenase | Rxycam_02259 | P31003 | - | 2186357 - 2187328 | 36468.9 |
| 4-carboxy-4-hydroxy-2-oxoadipate aldolase | Rxycam_02260 | A5W059 | - | 2187325 - 2187954 | 22254.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.