Kingdom
Bacillati
Phylum
Actinomycetota
Class
Rubrobacteria
Order
Rubrobacterales
Family
Rubrobacteraceae
Genus
Rubrobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Rubrobacteria |
| Order | Rubrobacterales |
| Family | Rubrobacteraceae |
| Genus | Rubrobacter |
| Species | Rubrobacter xylanophilus |
| Strain | PRD-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rubrobacter xylanophilus PRD-1
Accession NumberCP073779.1
Gene Summary
Adenine Count
488973 bp
Thymine Count
493569 bp
Guanine Count
1071447 bp
Cytosine Count
1071596 bp
Genome Length
3127021 bp
Protein-coding Genes
3145 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| l-lactate transporter | Rxycam_02201 | A0LNN5 | - | 2130415 - 2131674 | 43757.9 |
| sulfur carrier protein fdhd | Rxycam_02202 | Q9ZBW0 | - | 2131722 - 2132594 | 31722.1 |
| protein ydep | Rxycam_02203 | P77561 | - | 2132599 - 2134869 | 84513.2 |
| hypothetical protein | Rxycam_02204 | Not Available | - | 2134945 - 2135112 | 5939.03 |
| glutathione-independent formaldehyde dehydrogenase | Rxycam_02205 | Q9HTE3 | - | 2135250 - 2136422 | 42202.4 |
| hypothetical protein | Rxycam_02206 | Not Available | - | 2136655 - 2137047 | 14152.6 |
| hypothetical protein | Rxycam_02207 | Not Available | - | 2137102 - 2138796 | 62879.6 |
| sodium-dependent dicarboxylate transporter sdcs | Rxycam_02208 | Q49YW0 | - | 2138842 - 2140437 | 56286.0 |
| hypothetical protein | Rxycam_02209 | Not Available | - | 2140520 - 2141305 | 29653.7 |
| polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase tagu | Rxycam_02210 | Q8NLN8 | + | 2141470 - 2142288 | 28860.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.