Kingdom
Bacillati
Phylum
Actinomycetota
Class
Rubrobacteria
Order
Rubrobacterales
Family
Rubrobacteraceae
Genus
Rubrobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Rubrobacteria |
| Order | Rubrobacterales |
| Family | Rubrobacteraceae |
| Genus | Rubrobacter |
| Species | Rubrobacter xylanophilus |
| Strain | PRD-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rubrobacter xylanophilus PRD-1
Accession NumberCP073779.1
Gene Summary
Adenine Count
488973 bp
Thymine Count
493569 bp
Guanine Count
1071447 bp
Cytosine Count
1071596 bp
Genome Length
3127021 bp
Protein-coding Genes
3145 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Rxycam_02141 | Not Available | + | 2074398 - 2075216 | 29171.7 |
| hypothetical protein | Rxycam_02142 | A4J537 | + | 2075251 - 2076540 | 47748.8 |
| response regulator rcp1 | Rxycam_02143 | G7WMP8 | - | 2076537 - 2076998 | 17501.2 |
| hypothetical protein | Rxycam_02144 | Q6GE41 | + | 2077439 - 2079976 | 96295.4 |
| transcriptional regulatory protein degu | Rxycam_02145 | P9WMF8 | + | 2080029 - 2080694 | 24191.2 |
| diaminopimelate epimerase | Rxycam_02146 | A5D193 | - | 2080691 - 2081476 | 28188.6 |
| hypothetical protein | Rxycam_02147 | Not Available | + | 2081630 - 2081833 | 7593.95 |
| 4-hydroxy-tetrahydrodipicolinate reductase | Rxycam_02148 | Q1AZV2 | - | 2081830 - 2082609 | 26928.2 |
| 4-hydroxy-tetrahydrodipicolinate synthase | Rxycam_02149 | O67216 | - | 2082606 - 2083499 | 32038.5 |
| aspartate kinase | Rxycam_02150 | P53553 | - | 2083492 - 2084727 | 43512.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.