Kingdom
Bacillati
Phylum
Actinomycetota
Class
Rubrobacteria
Order
Rubrobacterales
Family
Rubrobacteraceae
Genus
Rubrobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Rubrobacteria |
| Order | Rubrobacterales |
| Family | Rubrobacteraceae |
| Genus | Rubrobacter |
| Species | Rubrobacter xylanophilus |
| Strain | PRD-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rubrobacter xylanophilus PRD-1
Accession NumberCP073779.1
Gene Summary
Adenine Count
488973 bp
Thymine Count
493569 bp
Guanine Count
1071447 bp
Cytosine Count
1071596 bp
Genome Length
3127021 bp
Protein-coding Genes
3145 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| is3 family transposase ismco1 | Rxycam_02111 | P16940 | - | 2048989 - 2049816 | 31684.0 |
| hypothetical protein | Rxycam_02112 | Not Available | - | 2049849 - 2050157 | 11872.2 |
| is3 family transposase ishor1 | Rxycam_02113 | P35878 | - | 2050449 - 2050910 | 17147.6 |
| hypothetical protein | Rxycam_02114 | Not Available | + | 2051329 - 2052339 | 35932.4 |
| hypothetical protein | Rxycam_02115 | Not Available | + | 2052876 - 2053322 | 16485.4 |
| hypothetical protein | Rxycam_02116 | Not Available | + | 2053303 - 2053446 | 5519.63 |
| putative succinyl-diaminopimelate desuccinylase dape | Rxycam_02117 | P9WHS8 | - | 2053491 - 2054567 | 39498.7 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | Rxycam_02118 | A9KC83 | - | 2054564 - 2055370 | 28990.0 |
| ll-diaminopimelate aminotransferase | Rxycam_02119 | Q3MDN5 | - | 2055417 - 2056589 | 43532.7 |
| diaminopimelate decarboxylase | Rxycam_02120 | O67262 | + | 2056706 - 2057956 | 45396.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.