Kingdom
Bacillati
Phylum
Actinomycetota
Class
Rubrobacteria
Order
Rubrobacterales
Family
Rubrobacteraceae
Genus
Rubrobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Rubrobacteria |
| Order | Rubrobacterales |
| Family | Rubrobacteraceae |
| Genus | Rubrobacter |
| Species | Rubrobacter xylanophilus |
| Strain | PRD-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rubrobacter xylanophilus PRD-1
Accession NumberCP073779.1
Gene Summary
Adenine Count
488973 bp
Thymine Count
493569 bp
Guanine Count
1071447 bp
Cytosine Count
1071596 bp
Genome Length
3127021 bp
Protein-coding Genes
3145 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nad/nadp-dependent betaine aldehyde dehydrogenase | Rxycam_02011 | O34660 | - | 1949225 - 1950586 | 48511.9 |
| putative glutamine amidotransferase | Rxycam_02012 | O33341 | - | 1950583 - 1951299 | 25497.4 |
| glutamate--isopropylamine ligase | Rxycam_02013 | O88070 | - | 1951296 - 1952666 | 51187.9 |
| putative amino acid permease yhdg | Rxycam_02014 | O87394 | - | 1952682 - 1954124 | 50605.4 |
| putative hth-type transcriptional regulator yurk | Rxycam_02015 | O31761 | + | 1954316 - 1955101 | 29037.2 |
| putative chaperone csaa | Rxycam_02016 | P37584 | + | 1955133 - 1955471 | 12495.2 |
| hypothetical protein | Rxycam_02017 | Not Available | + | 1955535 - 1956245 | 25070.8 |
| f420-dependent glucose-6-phosphate dehydrogenase | Rxycam_02018 | D6ZA79 | + | 1956322 - 1957284 | 34963.6 |
| leucine--trna ligase | Rxycam_02019 | Q1AR71 | - | 1957289 - 1959742 | 94346.5 |
| hypothetical protein | Rxycam_02020 | P73555 | - | 1959894 - 1960565 | 21339.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.