Kingdom
Bacillati
Phylum
Actinomycetota
Class
Rubrobacteria
Order
Rubrobacterales
Family
Rubrobacteraceae
Genus
Rubrobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Rubrobacteria |
| Order | Rubrobacterales |
| Family | Rubrobacteraceae |
| Genus | Rubrobacter |
| Species | Rubrobacter xylanophilus |
| Strain | PRD-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rubrobacter xylanophilus PRD-1
Accession NumberCP073779.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3145 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hydroxylase | Rxycam_00191 | Q643C1 | - | 180748 - 181695 | 35358.7 |
| diguanylate cyclase/phosphodiesterase (ggdef & eal domains) | Rxycam_00192 | Q9I310 | - | 181670 - 183703 | 74041.2 |
| rdd domain-containing protein | Rxycam_00193 | P42401 | - | 183749 - 184213 | 16449.2 |
| type iv major pilin pila | Rxycam_00194 | Q72JC0 | - | 184296 - 184709 | 15303.2 |
| type iv minor pilin pilx | Rxycam_00195 | Not Available | - | 184831 - 186288 | 52490.4 |
| type iv minor pilin pilw | Rxycam_00196 | Not Available | - | 186291 - 186863 | 21191.6 |
| type iv minor pilin pilv | Rxycam_00197 | Not Available | - | 186860 - 187285 | 15510.9 |
| type iv minor pilin pile | Rxycam_00198 | Not Available | - | 187278 - 187850 | 20983.1 |
| rna polymerase sigma factor | Rxycam_00199 | P35145 | - | 187863 - 188630 | 28533.8 |
| type iv pilus assembly protein pilc | Rxycam_00200 | Q5SK58 | - | 188648 - 189859 | 43864.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.