Kingdom
Bacillati
Phylum
Actinomycetota
Class
Rubrobacteria
Order
Rubrobacterales
Family
Rubrobacteraceae
Genus
Rubrobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Rubrobacteria |
| Order | Rubrobacterales |
| Family | Rubrobacteraceae |
| Genus | Rubrobacter |
| Species | Rubrobacter xylanophilus |
| Strain | PRD-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rubrobacter xylanophilus PRD-1
Accession NumberCP073779.1
Gene Summary
Adenine Count
488973 bp
Thymine Count
493569 bp
Guanine Count
1071447 bp
Cytosine Count
1071596 bp
Genome Length
3127021 bp
Protein-coding Genes
3145 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putrescine-binding periplasmic protein | Rxycam_01780 | P44731 | + | 1721460 - 1722551 | 40737.0 |
| spermidine/putrescine transport system permease protein potb | Rxycam_01781 | P0AFK4 | + | 1722583 - 1723419 | 30496.5 |
| inner membrane abc transporter permease protein ydcv | Rxycam_01782 | P0AFL2 | + | 1723421 - 1724224 | 28693.7 |
| hydroxyacylglutathione hydrolase | Rxycam_01783 | O34910 | + | 1724221 - 1724940 | 26261.6 |
| gamma-aminobutyraldehyde dehydrogenase | Rxycam_01784 | C6DD82 | + | 1724972 - 1726411 | 52525.1 |
| na(+), li(+), k(+)/h(+) antiporter | Rxycam_01785 | O34546 | + | 1726540 - 1727712 | 39928.6 |
| hypothetical protein | Rxycam_01786 | P58724 | - | 1727699 - 1729420 | 62847.4 |
| superoxide dismutase | Rxycam_01787 | P28760 | + | 1729542 - 1730174 | 23524.1 |
| coenzyme a disulfide reductase | Rxycam_01788 | O58308 | + | 1730255 - 1731613 | 48467.2 |
| hypothetical protein | Rxycam_01789 | Not Available | - | 1731598 - 1731696 | 3308.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.