Kingdom
Bacillati
Phylum
Actinomycetota
Class
Rubrobacteria
Order
Rubrobacterales
Family
Rubrobacteraceae
Genus
Rubrobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Rubrobacteria |
| Order | Rubrobacterales |
| Family | Rubrobacteraceae |
| Genus | Rubrobacter |
| Species | Rubrobacter xylanophilus |
| Strain | PRD-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rubrobacter xylanophilus PRD-1
Accession NumberCP073779.1
Gene Summary
Adenine Count
488973 bp
Thymine Count
493569 bp
Guanine Count
1071447 bp
Cytosine Count
1071596 bp
Genome Length
3127021 bp
Protein-coding Genes
3145 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Rxycam_01240 | Q8E5N2 | - | 1190819 - 1191460 | 24168.3 |
| glutathione transport system permease protein gsid | Rxycam_01241 | P94312 | - | 1191489 - 1192424 | 32706.4 |
| dipeptide transport system permease protein dppb | Rxycam_01242 | P94311 | - | 1192428 - 1193387 | 34942.8 |
| periplasmic dipeptide transport protein | Rxycam_01243 | P23847 | - | 1193482 - 1195179 | 62087.6 |
| endonuclease v | Rxycam_01244 | A5FRP8 | - | 1195276 - 1195968 | 24693.9 |
| protein-methionine-sulfoxide reductase catalytic subunit msrp | Rxycam_01245 | Q8R086 | - | 1196214 - 1197833 | 55892.8 |
| isoleucine--trna ligase | Rxycam_01246 | Q82AC9 | + | 1198299 - 1201418 | 119109.0 |
| hypothetical protein | Rxycam_01247 | Not Available | + | 1201518 - 1201967 | 16515.8 |
| hypothetical protein | Rxycam_01248 | Not Available | - | 1201976 - 1202359 | 14020.8 |
| hypothetical protein | Rxycam_01249 | Not Available | + | 1202412 - 1202969 | 20858.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.