Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lacus |
| Strain | IMCC1753 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lacus IMCC1753
Accession NumberCP035733.1
Gene Summary
Adenine Count
750717 bp
Thymine Count
750271 bp
Guanine Count
976518 bp
Cytosine Count
981137 bp
Genome Length
3458743 bp
Protein-coding Genes
3234 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| translation initiation factor if-2 | EUU25_04855 | Q1GVI9 | - | 1047647 - 1050172 | 91170.9 |
| duf448 domain-containing protein | EUU25_04860 | P32728 | - | 1050194 - 1050955 | 27122.4 |
| transcription termination/antitermination protein nusa | EUU25_04865 | Q92HF4 | - | 1050882 - 1052492 | 59706.7 |
| ribosome maturation protein rimp | EUU25_04870 | Q1GVJ2 | - | 1052485 - 1053057 | 20694.0 |
| pqq-dependent sugar dehydrogenase | EUU25_04875 | P75804 | + | 1053245 - 1054384 | 40767.2 |
| duf1499 domain-containing protein | EUU25_04880 | Not Available | - | 1054408 - 1055280 | 31600.9 |
| mfs transporter | EUU25_04885 | P02981 | + | 1055404 - 1056639 | 44034.6 |
| n-acetyltransferase | EUU25_04890 | P63419 | + | 1056645 - 1057124 | 17733.4 |
| hypothetical protein | EUU25_04895 | Not Available | - | 1057136 - 1057603 | 17164.7 |
| hypothetical protein | EUU25_04900 | Not Available | - | 1057644 - 1058300 | 23983.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.