Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lacus |
| Strain | IMCC1753 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lacus IMCC1753
Accession NumberCP035733.1
Gene Summary
Adenine Count
750717 bp
Thymine Count
750271 bp
Guanine Count
976518 bp
Cytosine Count
981137 bp
Genome Length
3458743 bp
Protein-coding Genes
3234 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna repair protein recn | EUU25_04805 | Q87BS5 | - | 1036562 - 1038217 | 58681.8 |
| outer membrane protein assembly factor bamd | EUU25_04810 | Q9A6U9 | - | 1038222 - 1039016 | 29691.2 |
| m20/m25/m40 family metallo-hydrolase | EUU25_04815 | Q0VGW4 | - | 1039114 - 1041330 | 79240.3 |
| polyribonucleotide nucleotidyltransferase | EUU25_04820 | Q1GVQ8 | - | 1041661 - 1043985 | 83435.7 |
| 30s ribosomal protein s15 | EUU25_04825 | Q1GVQ9 | - | 1044155 - 1044424 | 10217.5 |
| trna pseudouridine(55) synthase trub | EUU25_04830 | Q2G5F3 | - | 1044449 - 1045366 | 32525.1 |
| hypothetical protein | EUU25_04835 | Not Available | - | 1045412 - 1045762 | 12878.2 |
| thymidine kinase | EUU25_04840 | Q2G5F0 | - | 1045883 - 1046464 | 21064.3 |
| hypothetical protein | EUU25_04845 | Not Available | - | 1046487 - 1047005 | 19222.0 |
| 30s ribosome-binding factor rbfa | EUU25_04850 | Q1GVI8 | - | 1047103 - 1047504 | 14752.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.