Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lacus |
| Strain | IMCC1753 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lacus IMCC1753
Accession NumberCP035733.1
Gene Summary
Adenine Count
750717 bp
Thymine Count
750271 bp
Guanine Count
976518 bp
Cytosine Count
981137 bp
Genome Length
3458743 bp
Protein-coding Genes
3234 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sdr family oxidoreductase | EUU25_04755 | Q9KQH7 | + | 1027457 - 1028149 | 24397.0 |
| subclass b3 metallo-beta-lactamase | EUU25_04760 | P52700 | + | 1028139 - 1029041 | 32504.1 |
| 50s ribosomal protein l11 methyltransferase | EUU25_04765 | B0CHK5 | + | 1029038 - 1030012 | 35388.2 |
| sigma-70 family rna polymerase sigma factor | EUU25_04770 | A0PNM4 | + | 1030062 - 1030646 | 21076.2 |
| hypothetical protein | EUU25_04775 | Not Available | + | 1030625 - 1031329 | 24500.4 |
| fasciclin domain-containing protein | EUU25_04780 | P74615 | + | 1031426 - 1031995 | 19155.4 |
| phenylalanine 4-monooxygenase | EUU25_04785 | Q9A7V7 | - | 1032037 - 1032906 | 32781.8 |
| duf2459 domain-containing protein | EUU25_04790 | Not Available | + | 1032905 - 1033603 | 26142.6 |
| crp/fnr family transcriptional regulator | EUU25_04795 | P9WMH2 | - | 1033614 - 1034504 | 32819.9 |
| nad-dependent dna ligase liga | EUU25_04800 | Q1GVQ2 | - | 1034511 - 1036526 | 72349.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.