Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lacus |
| Strain | IMCC1753 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lacus IMCC1753
Accession NumberCP035733.1
Gene Summary
Adenine Count
750717 bp
Thymine Count
750271 bp
Guanine Count
976518 bp
Cytosine Count
981137 bp
Genome Length
3458743 bp
Protein-coding Genes
3234 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| zinc metalloprotease | EUU25_04705 | P64431 | + | 1017192 - 1018079 | 30990.8 |
| alpha-hydroxy-acid oxidizing protein | EUU25_04710 | P9WND4 | + | 1018085 - 1019233 | 41793.4 |
| cell envelope integrity protein cred | EUU25_04715 | P08369 | - | 1019214 - 1020623 | 50345.9 |
| lyse family translocator | EUU25_04720 | Q57Q25 | - | 1020739 - 1021353 | 21639.9 |
| llm class flavin-dependent oxidoreductase | EUU25_04725 | P0ADV6 | + | 1021430 - 1022416 | 34937.7 |
| hypothetical protein | EUU25_04730 | Not Available | - | 1022423 - 1023223 | 29638.5 |
| succinate dehydrogenase flavoprotein subunit | EUU25_04735 | Q68XN9 | - | 1023220 - 1025022 | 65287.4 |
| succinate dehydrogenase, hydrophobic membrane anchor protein | EUU25_04740 | Q1RHB6 | - | 1025022 - 1025411 | 13769.1 |
| succinate dehydrogenase, cytochrome b556 subunit | EUU25_04745 | Q59659 | - | 1025415 - 1025855 | 15909.6 |
| chemotaxis protein | EUU25_04750 | Q9HUW6 | + | 1026279 - 1027388 | 39224.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.