Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lacus |
| Strain | IMCC1753 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lacus IMCC1753
Accession NumberCP035733.1
Gene Summary
Adenine Count
750717 bp
Thymine Count
750271 bp
Guanine Count
976518 bp
Cytosine Count
981137 bp
Genome Length
3458743 bp
Protein-coding Genes
3234 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nadh-quinone oxidoreductase subunit a | EUU25_04355 | Q4FM91 | - | 943243 - 943617 | 14082.2 |
| ybjn domain-containing protein | EUU25_04360 | Not Available | + | 943810 - 944352 | 20668.5 |
| inositol monophosphatase | EUU25_04365 | Q92M71 | - | 944355 - 945173 | 29577.1 |
| elongation factor p | EUU25_04370 | A5VAL5 | - | 945173 - 945736 | 20958.9 |
| thiamine phosphate synthase | EUU25_04375 | Q2NB00 | - | 945817 - 946440 | 21841.9 |
| fructose bisphosphate aldolase | EUU25_04380 | Q07159 | - | 946511 - 947398 | 31690.2 |
| phosphoglycerate kinase | EUU25_04385 | Q1GTJ0 | - | 947477 - 948673 | 41910.3 |
| type i glyceraldehyde-3-phosphate dehydrogenase | EUU25_04390 | P09316 | - | 948685 - 949692 | 35825.9 |
| transketolase | EUU25_04395 | P29277 | - | 949704 - 951671 | 70067.3 |
| hypothetical protein | EUU25_04400 | Not Available | + | 951898 - 952089 | 6965.45 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.