Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lacus |
| Strain | IMCC1753 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lacus IMCC1753
Accession NumberCP035733.1
Gene Summary
Adenine Count
750717 bp
Thymine Count
750271 bp
Guanine Count
976518 bp
Cytosine Count
981137 bp
Genome Length
3458743 bp
Protein-coding Genes
3234 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tigr02281 family clan aa aspartic protease | EUU25_03805 | P29938 | - | 819455 - 820057 | 21719.0 |
| tatd family deoxyribonuclease | EUU25_03810 | P44718 | - | 820054 - 820830 | 28587.7 |
| methionine--trna ligase | EUU25_03815 | Q92PX0 | - | 820830 - 822398 | 58677.5 |
| aaa family atpase | EUU25_03820 | P52024 | - | 822421 - 823383 | 34709.6 |
| dtmp kinase | EUU25_03825 | A5V3I6 | - | 823380 - 824012 | 22666.9 |
| spor domain-containing protein | EUU25_03830 | A0A0H2ZFV1 | - | 824275 - 825252 | 33763.6 |
| lytic murein transglycosylase | EUU25_03835 | P41052 | - | 825236 - 826213 | 36096.0 |
| Trna-ser | Not Available | Not Available | + | 826504 - 826593 | Not Available |
| hypothetical protein | EUU25_03845 | Not Available | - | 826642 - 827229 | 22187.5 |
| hypothetical protein | EUU25_03850 | Not Available | - | 827349 - 827693 | 12596.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.