Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lacus |
| Strain | IMCC1753 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lacus IMCC1753
Accession NumberCP035733.1
Gene Summary
Adenine Count
750717 bp
Thymine Count
750271 bp
Guanine Count
976518 bp
Cytosine Count
981137 bp
Genome Length
3458743 bp
Protein-coding Genes
3234 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| peptidase m28 family protein | EUU25_03705 | Q17QK3 | - | 798787 - 800160 | 48285.8 |
| energy-dependent translational throttle protein etta | EUU25_03710 | P9WQK2 | + | 800276 - 801955 | 62392.2 |
| hypothetical protein | EUU25_03715 | Not Available | + | 801962 - 802792 | 29645.4 |
| hypothetical protein | EUU25_03720 | Not Available | + | 802957 - 803733 | 27952.1 |
| flavin-binding protein | EUU25_03725 | Not Available | - | 803710 - 804339 | 23371.5 |
| carbonic anhydrase | EUU25_03730 | P46512 | - | 804336 - 804959 | 22244.6 |
| transcriptional regulator | EUU25_03735 | Not Available | - | 804960 - 805271 | 11199.6 |
| sodium-dependent bicarbonate transport family permease | EUU25_03740 | Not Available | - | 805275 - 806222 | 32058.4 |
| lipoyl synthase | EUU25_03745 | Q1GTM7 | + | 806307 - 807233 | 34027.1 |
| type ii toxin-antitoxin system rata family toxin | EUU25_03750 | O68560 | + | 807251 - 807709 | 17096.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.