Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lacus |
| Strain | IMCC1753 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lacus IMCC1753
Accession NumberCP035733.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3234 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phosphogluconate dehydratase | EUU25_02555 | P21909 | + | 574857 - 576680 | 64004.2 |
| glucokinase | EUU25_02560 | P21908 | + | 576680 - 577651 | 34039.9 |
| bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | EUU25_02565 | Q00384 | + | 577648 - 578262 | 20682.5 |
| 6-phosphogluconolactonase | EUU25_02570 | Q9Z3S1 | + | 578278 - 578985 | 24904.8 |
| pilz domain-containing protein | EUU25_02575 | Not Available | - | 578988 - 579374 | 14271.3 |
| rna polymerase-binding protein dksa | EUU25_02580 | P0CAU3 | - | 579539 - 580003 | 17655.5 |
| sigma-54-dependent fis family transcriptional regulator | EUU25_02585 | Not Available | - | 580473 - 581180 | 25350.9 |
| hypothetical protein | EUU25_02590 | Not Available | - | 581265 - 581552 | 10752.8 |
| serine--trna ligase | EUU25_02595 | Q2GA28 | + | 581804 - 583084 | 46712.4 |
| 5'/3'-nucleotidase sure | EUU25_02600 | Q2NDM8 | + | 583084 - 583851 | 27450.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.