Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lacus |
| Strain | IMCC1753 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lacus IMCC1753
Accession NumberCP035733.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3234 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sarcosine oxidase subunit delta | EUU25_02205 | O87387 | - | 487820 - 488083 | 9858.81 |
| sarcosine oxidase subunit beta family protein | EUU25_02210 | O87388 | - | 488083 - 489339 | 45091.0 |
| fad-binding oxidoreductase | EUU25_02215 | O87388 | - | 489336 - 490472 | 40944.1 |
| fad-dependent oxidoreductase | EUU25_02220 | Q59160 | - | 490469 - 491932 | 51596.0 |
| cystathionine gamma-synthase family protein | EUU25_02225 | A0A0J6G7P5 | - | 491932 - 493191 | 44977.9 |
| aromatic ring-hydroxylating dioxygenase subunit alpha | EUU25_02230 | P0ABR8 | - | 493178 - 494389 | 45091.4 |
| lysr family transcriptional regulator | EUU25_02235 | Q57083 | + | 494533 - 495480 | 34791.8 |
| formate dehydrogenase accessory sulfurtransferase fdhd | EUU25_02240 | Q3BS67 | - | 495428 - 496231 | 28448.3 |
| formate dehydrogenase | EUU25_02245 | Not Available | - | 496218 - 496403 | 6682.98 |
| formate dehydrogenase subunit alpha | EUU25_02250 | Q4L8G8 | - | 496427 - 499285 | 104052.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.