Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lacus |
| Strain | IMCC1753 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lacus IMCC1753
Accession NumberCP035733.1
Gene Summary
Adenine Count
750717 bp
Thymine Count
750271 bp
Guanine Count
976518 bp
Cytosine Count
981137 bp
Genome Length
3458743 bp
Protein-coding Genes
3234 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l27 | EUU25_12305 | Q2G9U8 | + | 2618380 - 2618649 | 9378.45 |
| n-acetyltransferase | EUU25_12310 | O34569 | + | 2618852 - 2619442 | 21831.9 |
| metal-dependent hydrolase | EUU25_12315 | Not Available | - | 2619439 - 2620365 | 34604.2 |
| tetr/acrr family transcriptional regulator | EUU25_12320 | Not Available | + | 2620774 - 2621370 | 20966.9 |
| sdr family nad(p)-dependent oxidoreductase | EUU25_12325 | Q04871 | - | 2621377 - 2622357 | 35634.7 |
| cation:proton antiporter | EUU25_12330 | Q1HDT3 | - | 2622422 - 2623633 | 44458.3 |
| hypothetical protein | EUU25_12335 | Not Available | - | 2623718 - 2624017 | 10704.6 |
| pantoate--beta-alanine ligase | EUU25_12340 | Q1GNR4 | - | 2624127 - 2624966 | 30021.9 |
| atpase | EUU25_12345 | Not Available | + | 2625065 - 2625847 | 29435.3 |
| hypothetical protein | EUU25_12350 | Q54QN1 | + | 2625857 - 2626261 | 14718.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.