Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lacus |
| Strain | IMCC1753 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lacus IMCC1753
Accession NumberCP035733.1
Gene Summary
Adenine Count
750717 bp
Thymine Count
750271 bp
Guanine Count
976518 bp
Cytosine Count
981137 bp
Genome Length
3458743 bp
Protein-coding Genes
3234 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lps export abc transporter periplasmic protein lptc | EUU25_11605 | Not Available | + | 2471405 - 2472040 | 23298.2 |
| osta family protein | EUU25_11610 | P25893 | + | 2472066 - 2472578 | 17089.1 |
| lps export abc transporter atp-binding protein | EUU25_11615 | P33982 | + | 2472683 - 2473462 | 27570.4 |
| rna polymerase sigma-54 factor | EUU25_11620 | P22881 | + | 2473516 - 2475006 | 54038.2 |
| polysaccharide biosynthesis protein | EUU25_11625 | Not Available | + | 2475079 - 2476752 | 59353.3 |
| hypothetical protein | EUU25_11630 | Not Available | - | 2476738 - 2477544 | 28724.6 |
| hypothetical protein | EUU25_11635 | Q44587 | + | 2477543 - 2478340 | 29398.1 |
| hypothetical protein | EUU25_11640 | Q46843 | + | 2478340 - 2479035 | 24903.5 |
| hypothetical protein | EUU25_11645 | Q2W4T8 | - | 2479021 - 2480667 | 59683.3 |
| alpha/beta hydrolase | EUU25_11650 | P96402 | - | 2480746 - 2481636 | 32228.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.