Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lacus |
| Strain | IMCC1753 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lacus IMCC1753
Accession NumberCP035733.1
Gene Summary
Adenine Count
750717 bp
Thymine Count
750271 bp
Guanine Count
976518 bp
Cytosine Count
981137 bp
Genome Length
3458743 bp
Protein-coding Genes
3234 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| had family hydrolase | EUU25_11555 | Not Available | - | 2465243 - 2465890 | 24184.7 |
| duf3572 family protein | EUU25_11560 | Not Available | - | 2465887 - 2466156 | 9709.68 |
| response regulator | EUU25_11565 | B2SB45 | + | 2466210 - 2466575 | 13336.6 |
| ionic transporter y4ha | EUU25_11570 | P55471 | - | 2466587 - 2467660 | 36749.3 |
| 50s ribosomal protein l33 | EUU25_11575 | Q2N758 | - | 2467772 - 2467939 | 6459.06 |
| hypothetical protein | EUU25_11580 | Not Available | + | 2468168 - 2468503 | 12101.5 |
| tmem165/gdt1 family protein | EUU25_11585 | A0A0H3AJF5 | + | 2468564 - 2469130 | 20165.2 |
| dna starvation/stationary phase protection protein | EUU25_11590 | P73321 | + | 2469232 - 2469696 | 17044.9 |
| cold-shock protein | EUU25_11595 | P55390 | - | 2469769 - 2470545 | 27262.6 |
| ribonuclease d | EUU25_11600 | A9H9B7 | + | 2470763 - 2471380 | 22988.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.