Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lacus |
| Strain | IMCC1753 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lacus IMCC1753
Accession NumberCP035733.1
Gene Summary
Adenine Count
750717 bp
Thymine Count
750271 bp
Guanine Count
976518 bp
Cytosine Count
981137 bp
Genome Length
3458743 bp
Protein-coding Genes
3234 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| suf system fe-s cluster assembly regulator | EUU25_11355 | Q9R9M8 | + | 2426642 - 2427055 | 14003.0 |
| fe-s cluster assembly protein sufb | EUU25_11360 | Q55790 | + | 2427052 - 2428566 | 55481.4 |
| hypothetical protein | EUU25_11365 | Not Available | + | 2428566 - 2429000 | 14965.7 |
| fe-s cluster assembly atpase sufc | EUU25_11370 | P48255 | + | 2428984 - 2429727 | 26718.4 |
| sufd family fe-s cluster assembly protein | EUU25_11375 | P77689 | + | 2429831 - 2430559 | 25240.0 |
| cysteine desulfurase | EUU25_11380 | A7MF59 | + | 2430586 - 2431767 | 42224.7 |
| duf59 domain-containing protein | EUU25_11385 | P70949 | + | 2431764 - 2432222 | 16494.5 |
| iron-sulfur cluster assembly accessory protein | EUU25_11390 | Q8T3X9 | + | 2432219 - 2432575 | 12375.7 |
| peptidase s8 | EUU25_11395 | P00781 | - | 2432585 - 2434984 | 82275.7 |
| pyrimidine 5'-nucleotidase | EUU25_11400 | Q09893 | + | 2435100 - 2435774 | 25390.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.