Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lacus |
| Strain | IMCC1753 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lacus IMCC1753
Accession NumberCP035733.1
Gene Summary
Adenine Count
750717 bp
Thymine Count
750271 bp
Guanine Count
976518 bp
Cytosine Count
981137 bp
Genome Length
3458743 bp
Protein-coding Genes
3234 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| vit family protein | EUU25_11255 | Q9P6J2 | - | 2409918 - 2410613 | 23467.4 |
| smp-30/gluconolactonase/lre family protein | EUU25_11260 | Q4L9R6 | - | 2410629 - 2411549 | 32446.5 |
| n-acetyltransferase family protein | EUU25_11265 | P31668 | - | 2411592 - 2412170 | 20494.2 |
| universal stress protein | EUU25_11270 | Not Available | + | 2412325 - 2413140 | 29056.8 |
| amino acid permease | EUU25_11275 | P60065 | + | 2413214 - 2414527 | 45294.5 |
| nad-dependent succinate-semialdehyde dehydrogenase | EUU25_11280 | Q1JUP4 | + | 2414569 - 2415996 | 50825.0 |
| duf454 domain-containing protein | EUU25_11285 | P0AAR6 | + | 2415996 - 2416349 | 12815.0 |
| beta-carotene hydroxylase | EUU25_11290 | P21688 | - | 2416353 - 2416868 | 19067.4 |
| 3-isopropylmalate dehydratase large subunit | EUU25_11295 | Q2G958 | + | 2416963 - 2418393 | 50308.7 |
| hypothetical protein | EUU25_11300 | Not Available | + | 2418476 - 2418769 | 11002.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.