Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lacus |
| Strain | IMCC1753 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lacus IMCC1753
Accession NumberCP035733.1
Gene Summary
Adenine Count
750717 bp
Thymine Count
750271 bp
Guanine Count
976518 bp
Cytosine Count
981137 bp
Genome Length
3458743 bp
Protein-coding Genes
3234 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| membrane dipeptidase | EUU25_11155 | M1VV65 | - | 2392903 - 2394075 | 42885.2 |
| Trna-met | Not Available | Not Available | + | 2394288 - 2394364 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | + | 2394500 - 2394614 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | + | 2394747 - 2397550 | Not Available |
| Trna-ala | Not Available | Not Available | + | 2397810 - 2397885 | Not Available |
| Trna-ile | Not Available | Not Available | + | 2397906 - 2397982 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | + | 2398155 - 2399651 | Not Available |
| lipopolysaccharide biosynthesis protein | EUU25_11190 | P33699 | + | 2400097 - 2401608 | 54619.1 |
| isopenicillin n synthase family oxygenase | EUU25_11195 | C8VK14 | - | 2401598 - 2402536 | 34524.3 |
| eve domain-containing protein | EUU25_11200 | Q91YJ3 | + | 2402601 - 2403014 | 15569.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.