Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lacus |
| Strain | IMCC1753 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lacus IMCC1753
Accession NumberCP035733.1
Gene Summary
Adenine Count
750717 bp
Thymine Count
750271 bp
Guanine Count
976518 bp
Cytosine Count
981137 bp
Genome Length
3458743 bp
Protein-coding Genes
3234 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EUU25_11105 | Not Available | + | 2380882 - 2381670 | 27074.4 |
| hypothetical protein | EUU25_11110 | Not Available | + | 2381784 - 2382287 | 18491.7 |
| hypothetical protein | EUU25_11115 | Not Available | + | 2382284 - 2383201 | 31079.0 |
| hypothetical protein | EUU25_11120 | P18895 | - | 2383284 - 2384591 | 48778.4 |
| duf2252 domain-containing protein | EUU25_11125 | Not Available | - | 2384588 - 2386909 | 84290.3 |
| abc transporter atp-binding protein | EUU25_11130 | O31708 | - | 2386806 - 2388533 | 61162.5 |
| glycosyltransferase family 1 protein | EUU25_11135 | B1VEI4 | - | 2388647 - 2389798 | 41129.3 |
| colanic acid biosynthesis glycosyltransferase wcal | EUU25_11140 | P26388 | - | 2389804 - 2391021 | 43958.8 |
| glycosyl transferase family 28 | EUU25_11145 | Q5PB22 | - | 2391042 - 2392277 | 44669.0 |
| Trna-leu | Not Available | Not Available | + | 2392749 - 2392835 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.