Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lacus |
| Strain | IMCC1753 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lacus IMCC1753
Accession NumberCP035733.1
Gene Summary
Adenine Count
750717 bp
Thymine Count
750271 bp
Guanine Count
976518 bp
Cytosine Count
981137 bp
Genome Length
3458743 bp
Protein-coding Genes
3234 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EUU25_10955 | Not Available | + | 2342292 - 2342684 | 14529.5 |
| tol-pal system-associated acyl-coa thioesterase | EUU25_10960 | P44679 | + | 2342782 - 2343234 | 16923.0 |
| protein tolq | EUU25_10965 | P50598 | + | 2343243 - 2343938 | 25174.1 |
| protein tolr | EUU25_10970 | Q9RMT1 | + | 2343938 - 2344393 | 16064.5 |
| hypothetical protein | EUU25_10975 | Not Available | + | 2344405 - 2345232 | 28371.0 |
| tol-pal system protein tolb | EUU25_10980 | Q2G9L1 | + | 2345240 - 2346613 | 49715.5 |
| peptidoglycan-associated lipoprotein pal | EUU25_10985 | Q926C3 | + | 2346664 - 2347194 | 19198.3 |
| duf898 domain-containing protein | EUU25_10990 | P39338 | + | 2347308 - 2348396 | 41389.2 |
| m48 family metallopeptidase | EUU25_10995 | P25894 | + | 2348400 - 2349488 | 39274.0 |
| hypothetical protein | EUU25_11000 | Not Available | + | 2349527 - 2349781 | 9510.69 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.