Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lacus |
| Strain | IMCC1753 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lacus IMCC1753
Accession NumberCP035733.1
Gene Summary
Adenine Count
750717 bp
Thymine Count
750271 bp
Guanine Count
976518 bp
Cytosine Count
981137 bp
Genome Length
3458743 bp
Protein-coding Genes
3234 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EUU25_10755 | P75925 | + | 2297426 - 2298673 | 44637.0 |
| m3 family peptidase | EUU25_10760 | P24171 | - | 2299008 - 2301134 | 79241.0 |
| hypothetical protein | EUU25_10765 | Not Available | + | 2301352 - 2302275 | 34394.2 |
| Trna-val | Not Available | Not Available | + | 2302327 - 2302402 | Not Available |
| tlpa family protein disulfide reductase | EUU25_10775 | P43221 | - | 2302704 - 2303291 | 20524.4 |
| argininosuccinate lyase | EUU25_10780 | Q9Z660 | + | 2303314 - 2304684 | 49239.7 |
| sigma-54-dependent fis family transcriptional regulator | EUU25_10785 | Not Available | + | 2304681 - 2304920 | 8601.32 |
| diaminopimelate decarboxylase | EUU25_10790 | Q9Z661 | + | 2304999 - 2306261 | 44505.2 |
| siroheme synthase | EUU25_10795 | Q606C9 | + | 2306274 - 2307053 | 27234.3 |
| pyrroline-5-carboxylate reductase | EUU25_10800 | P22008 | + | 2307098 - 2307898 | 27261.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.