Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lacus |
| Strain | IMCC1753 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lacus IMCC1753
Accession NumberCP035733.1
Gene Summary
Adenine Count
750717 bp
Thymine Count
750271 bp
Guanine Count
976518 bp
Cytosine Count
981137 bp
Genome Length
3458743 bp
Protein-coding Genes
3234 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf2093 domain-containing protein | EUU25_10705 | Not Available | + | 2284848 - 2285051 | 7376.99 |
| m23 family peptidase | EUU25_10710 | P44693 | + | 2285083 - 2286009 | 32212.3 |
| hypothetical protein | EUU25_10715 | Not Available | - | 2286025 - 2286558 | 19890.1 |
| ggdef and eal domain-containing protein | EUU25_10720 | Q9ABX9 | - | 2286636 - 2288882 | 81327.5 |
| hupe/urej family protein | EUU25_10725 | Not Available | - | 2288966 - 2289865 | 32196.8 |
| peptidyl-prolyl cis-trans isomerase | EUU25_10730 | Not Available | - | 2289940 - 2290776 | 31344.0 |
| tir domain-containing protein | EUU25_10735 | Q9Z3Q0 | + | 2290894 - 2292840 | 70120.9 |
| hypothetical protein | EUU25_10740 | Not Available | + | 2292869 - 2293135 | 8991.01 |
| trypsin-like serine protease | EUU25_10745 | P54627 | - | 2293143 - 2295152 | 72902.2 |
| hypothetical protein | EUU25_10750 | Not Available | - | 2295257 - 2297245 | 72668.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.