Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lacus |
| Strain | IMCC1753 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lacus IMCC1753
Accession NumberCP035733.1
Gene Summary
Adenine Count
750717 bp
Thymine Count
750271 bp
Guanine Count
976518 bp
Cytosine Count
981137 bp
Genome Length
3458743 bp
Protein-coding Genes
3234 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cytochrome p450 | EUU25_10655 | Q59723 | + | 2276693 - 2277973 | 49457.2 |
| peptide-methionine (r)-s-oxide reductase | EUU25_10660 | Q72NN2 | + | 2278036 - 2278518 | 17512.1 |
| ankyrin repeat domain-containing protein | EUU25_10665 | Q9NU02 | - | 2278522 - 2279175 | 23406.1 |
| sco family protein | EUU25_10670 | Q4UKW2 | + | 2279234 - 2279869 | 22954.4 |
| ycgn family cysteine cluster protein | EUU25_10675 | A5VA56 | + | 2279878 - 2280312 | 16192.3 |
| m48 family peptidase | EUU25_10680 | Not Available | + | 2280224 - 2281003 | 29634.9 |
| duf1272 domain-containing protein | EUU25_10685 | P42878 | + | 2281013 - 2281201 | 6806.26 |
| hypothetical protein | EUU25_10690 | P29908 | - | 2281231 - 2282046 | 26878.2 |
| phosphoribosylamine--glycine ligase | EUU25_10695 | Q986A5 | - | 2282121 - 2283392 | 43992.0 |
| exodeoxyribonuclease vii large subunit | EUU25_10700 | Q2N6Q7 | + | 2283391 - 2284803 | 50526.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.