Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lacus |
| Strain | IMCC1753 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lacus IMCC1753
Accession NumberCP035733.1
Gene Summary
Adenine Count
750717 bp
Thymine Count
750271 bp
Guanine Count
976518 bp
Cytosine Count
981137 bp
Genome Length
3458743 bp
Protein-coding Genes
3234 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf1905 domain-containing protein | EUU25_10555 | Not Available | + | 2258962 - 2259282 | 11746.2 |
| flia/whig family rna polymerase sigma factor | EUU25_10560 | P29248 | - | 2259279 - 2259992 | 26268.5 |
| flagellar biosynthesis protein flha | EUU25_10565 | P40729 | - | 2259979 - 2262093 | 74505.6 |
| lytic transglycosylase domain-containing protein | EUU25_10570 | Q8SCY1 | - | 2262090 - 2262872 | 27968.6 |
| hypothetical protein | EUU25_10575 | Not Available | - | 2262940 - 2263233 | 10742.0 |
| flagellar biosynthesis anti-sigma factor flgm | EUU25_10580 | Not Available | - | 2263238 - 2263528 | 9828.8 |
| hypothetical protein | EUU25_10585 | Not Available | - | 2263739 - 2264170 | 15049.4 |
| alpha/beta fold hydrolase | EUU25_10590 | Not Available | - | 2264272 - 2264991 | 25789.9 |
| hypothetical protein | EUU25_10595 | Not Available | - | 2265041 - 2265874 | 29181.0 |
| uroporphyrinogen-iii synthase | EUU25_10600 | Not Available | - | 2265934 - 2266587 | 23341.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.