Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lacus |
| Strain | IMCC1753 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lacus IMCC1753
Accession NumberCP035733.1
Gene Summary
Adenine Count
750717 bp
Thymine Count
750271 bp
Guanine Count
976518 bp
Cytosine Count
981137 bp
Genome Length
3458743 bp
Protein-coding Genes
3234 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| voc family protein | EUU25_10505 | P39586 | - | 2249643 - 2250188 | 20613.1 |
| nad(p)h:quinone oxidoreductase | EUU25_10510 | A4JT91 | - | 2250231 - 2250833 | 20962.9 |
| tonb-dependent receptor | EUU25_10515 | P46359 | - | 2250843 - 2253038 | 79970.6 |
| iclr family transcriptional regulator | EUU25_10520 | Q52154 | - | 2253140 - 2253952 | 29715.5 |
| coa transferase | EUU25_10525 | P76518 | - | 2253952 - 2255103 | 42663.0 |
| citryl-coa lyase | EUU25_10530 | P39120 | + | 2255184 - 2255960 | 27197.0 |
| duf393 domain-containing protein | EUU25_10535 | Q8W485 | + | 2256005 - 2256349 | 13289.5 |
| aarf/abc1/ubib kinase family protein | EUU25_10540 | P27697 | + | 2256346 - 2257659 | 48361.4 |
| Trna-ser | Not Available | Not Available | + | 2257765 - 2257855 | Not Available |
| peptidylprolyl isomerase | EUU25_10550 | Not Available | + | 2257936 - 2258949 | 36900.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.