Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lacus |
| Strain | IMCC1753 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lacus IMCC1753
Accession NumberCP035733.1
Gene Summary
Adenine Count
750717 bp
Thymine Count
750271 bp
Guanine Count
976518 bp
Cytosine Count
981137 bp
Genome Length
3458743 bp
Protein-coding Genes
3234 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 5-aminolevulinate synthase | EUU25_10405 | P26505 | + | 2225295 - 2226515 | 44316.0 |
| cytochrome c family protein | EUU25_10410 | P92504 | - | 2226585 - 2227115 | 17497.9 |
| duf3422 family protein | EUU25_10415 | Not Available | - | 2227227 - 2228507 | 48027.6 |
| nad-dependent epimerase/dehydratase family protein | EUU25_10420 | B6SZW0 | - | 2228562 - 2229551 | 35955.1 |
| superoxide dismutase | EUU25_10425 | P50061 | + | 2229757 - 2230368 | 22807.5 |
| glycosyltransferase | EUU25_10430 | C7QKE8 | + | 2230668 - 2232932 | 82516.6 |
| glycosidase | EUU25_10435 | Q92DF6 | + | 2232975 - 2234228 | 46362.5 |
| aminoglycoside phosphotransferase family protein | EUU25_10440 | Not Available | - | 2234483 - 2235532 | 38297.5 |
| hypothetical protein | EUU25_10445 | Not Available | - | 2235541 - 2236659 | 40970.6 |
| hypothetical protein | EUU25_10450 | Not Available | + | 2236878 - 2237924 | 37380.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.