Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lacus |
| Strain | IMCC1753 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lacus IMCC1753
Accession NumberCP035733.1
Gene Summary
Adenine Count
750717 bp
Thymine Count
750271 bp
Guanine Count
976518 bp
Cytosine Count
981137 bp
Genome Length
3458743 bp
Protein-coding Genes
3234 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf3604 domain-containing protein | EUU25_10155 | Not Available | - | 2165893 - 2167791 | 69119.8 |
| duf1254 domain-containing protein | EUU25_10160 | Not Available | - | 2167788 - 2169221 | 52520.9 |
| crp/fnr family transcriptional regulator | EUU25_10165 | Q79VI7 | + | 2169316 - 2170005 | 25569.3 |
| glutathione s-transferase family protein | EUU25_10170 | Not Available | - | 2170082 - 2171233 | 43061.5 |
| arac family transcriptional regulator | EUU25_10175 | P9WMJ2 | + | 2171370 - 2172428 | 38235.9 |
| tonb-dependent receptor | EUU25_10180 | A5F661 | + | 2172541 - 2175135 | 92070.6 |
| s9 family peptidase | EUU25_10185 | V5YMB3 | + | 2175371 - 2177302 | 70321.0 |
| hypothetical protein | EUU25_10190 | Not Available | - | 2177503 - 2177859 | 12863.1 |
| ompa family protein | EUU25_10195 | Q05146 | - | 2178017 - 2178880 | 30429.1 |
| shlb/fhac/hecb family hemolysin secretion/activation protein | EUU25_10200 | Q4QNS5 | - | 2179134 - 2180816 | 60242.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.