Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lacus |
| Strain | IMCC1753 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lacus IMCC1753
Accession NumberCP035733.1
Gene Summary
Adenine Count
750717 bp
Thymine Count
750271 bp
Guanine Count
976518 bp
Cytosine Count
981137 bp
Genome Length
3458743 bp
Protein-coding Genes
3234 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| histidine--trna ligase | EUU25_10005 | Q2GBN6 | - | 2134256 - 2135575 | 48392.7 |
| m61 family peptidase | EUU25_10010 | Not Available | + | 2135902 - 2137839 | 71863.1 |
| inorganic diphosphatase | EUU25_10015 | Q89WY0 | + | 2137859 - 2138395 | 19740.9 |
| hypothetical protein | EUU25_10020 | Not Available | + | 2138392 - 2138703 | 11102.0 |
| signal peptide peptidase sppa | EUU25_10025 | P08395 | - | 2138700 - 2140574 | 65596.1 |
| hypothetical protein | EUU25_10030 | Not Available | - | 2140973 - 2141503 | 18737.6 |
| tlya family rna methyltransferase | EUU25_10035 | P19672 | + | 2141553 - 2142293 | 26611.0 |
| m1 family peptidase | EUU25_10040 | Q11011 | + | 2142320 - 2144983 | 95974.8 |
| hypothetical protein | EUU25_10045 | Not Available | + | 2145109 - 2145627 | 17848.3 |
| long-chain fatty acid--coa ligase | EUU25_10050 | B2HGV4 | - | 2145972 - 2147783 | 66952.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.