Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lacus |
| Strain | IMCC1753 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lacus IMCC1753
Accession NumberCP035733.1
Gene Summary
Adenine Count
750717 bp
Thymine Count
750271 bp
Guanine Count
976518 bp
Cytosine Count
981137 bp
Genome Length
3458743 bp
Protein-coding Genes
3234 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf4197 domain-containing protein | EUU25_09905 | Not Available | - | 2109295 - 2109975 | 24098.2 |
| primosomal protein n' | EUU25_09910 | P05445 | + | 2110081 - 2112258 | 79211.5 |
| penicillin-binding protein | EUU25_09915 | P70997 | + | 2112312 - 2114414 | 76292.2 |
| serine protease | EUU25_09920 | Q2W8Q8 | + | 2114426 - 2115994 | 55727.8 |
| hypothetical protein | EUU25_09925 | A0A0H2ZI72 | + | 2115998 - 2117485 | 54777.1 |
| duf4112 domain-containing protein | EUU25_09930 | Not Available | + | 2117505 - 2117927 | 15337.9 |
| ribonuclease t | EUU25_09935 | P44012 | - | 2117914 - 2118705 | 29701.9 |
| carboxylating nicotinate-nucleotide diphosphorylase | EUU25_09940 | P77938 | - | 2118709 - 2119557 | 29905.1 |
| quinolinate synthase nada | EUU25_09945 | Q8YN94 | - | 2119620 - 2120609 | 36060.5 |
| duf4230 domain-containing protein | EUU25_09950 | Not Available | - | 2120688 - 2121347 | 24082.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.