Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lacus |
| Strain | IMCC1753 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lacus IMCC1753
Accession NumberCP035733.1
Gene Summary
Adenine Count
750717 bp
Thymine Count
750271 bp
Guanine Count
976518 bp
Cytosine Count
981137 bp
Genome Length
3458743 bp
Protein-coding Genes
3234 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | EUU25_09805 | Not Available | - | 2089231 - 2092404 | 113665.0 |
| tryptophan 7-halogenase | EUU25_09810 | P95480 | + | 2092584 - 2094089 | 55997.6 |
| Trna-met | Not Available | Not Available | + | 2094122 - 2094198 | Not Available |
| 2'-5' rna ligase family protein | EUU25_09820 | Not Available | - | 2094276 - 2094782 | 18852.8 |
| 50s ribosomal protein l9 | EUU25_09825 | Q2G8G5 | - | 2094862 - 2095542 | 23923.1 |
| 30s ribosomal protein s18 | EUU25_09830 | Q2G8G4 | - | 2095554 - 2095778 | 8553.69 |
| 30s ribosomal protein s6 | EUU25_09835 | Q2G8G3 | - | 2095782 - 2096219 | 16580.6 |
| ggdef domain-containing protein | EUU25_09840 | Q9KKZ4 | - | 2096409 - 2097536 | 40669.6 |
| udp-n-acetylmuramate--alanine ligase | EUU25_09845 | Q9X827 | - | 2097590 - 2098981 | 49105.8 |
| ld-carboxypeptidase | EUU25_09850 | Q9HTZ1 | + | 2099071 - 2099907 | 30176.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.