Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lacus |
| Strain | IMCC1753 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lacus IMCC1753
Accession NumberCP035733.1
Gene Summary
Adenine Count
750717 bp
Thymine Count
750271 bp
Guanine Count
976518 bp
Cytosine Count
981137 bp
Genome Length
3458743 bp
Protein-coding Genes
3234 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EUU25_09705 | Not Available | + | 2068514 - 2068711 | 6715.99 |
| amidohydrolase | EUU25_09710 | P80092 | + | 2068835 - 2070037 | 42457.0 |
| membrane dipeptidase | EUU25_09715 | P31430 | - | 2070089 - 2071306 | 43733.4 |
| l-aspartate oxidase | EUU25_09720 | Q51363 | - | 2071397 - 2072971 | 57693.8 |
| abc transporter atp-binding protein | EUU25_09725 | P36879 | - | 2072971 - 2073888 | 33134.3 |
| duf4402 domain-containing protein | EUU25_09730 | Not Available | + | 2073942 - 2074514 | 19812.8 |
| duf4402 domain-containing protein | EUU25_09735 | Not Available | + | 2074582 - 2075130 | 18659.4 |
| zinc-finger domain-containing protein | EUU25_09740 | Q19724 | + | 2075170 - 2075364 | 6968.27 |
| pyridoxal-dependent decarboxylase, exosortase a system-associated | EUU25_09745 | Q2L4H3 | - | 2075361 - 2076587 | 42438.0 |
| hypothetical protein | EUU25_09750 | Not Available | + | 2076807 - 2077607 | 29385.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.