Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lacus |
| Strain | IMCC1753 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lacus IMCC1753
Accession NumberCP035733.1
Gene Summary
Adenine Count
750717 bp
Thymine Count
750271 bp
Guanine Count
976518 bp
Cytosine Count
981137 bp
Genome Length
3458743 bp
Protein-coding Genes
3234 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l10 | EUU25_09555 | Q1GSF8 | + | 2040017 - 2040532 | 17595.2 |
| 50s ribosomal protein l7/l12 | EUU25_09560 | Q2N5R5 | + | 2040608 - 2040982 | 12493.0 |
| hypothetical protein | EUU25_09565 | Not Available | - | 2041059 - 2041955 | 30910.6 |
| transcriptional regulator | EUU25_09570 | O31834 | - | 2042261 - 2042473 | 7755.55 |
| duf2975 domain-containing protein | EUU25_09575 | Not Available | - | 2042473 - 2043003 | 19078.1 |
| adenine phosphoribosyltransferase | EUU25_09580 | Q2N669 | + | 2043145 - 2043681 | 18806.0 |
| class i sam-dependent methyltransferase | EUU25_09585 | Q2SN12 | - | 2043863 - 2044543 | 24897.7 |
| acyl-coa thioesterase | EUU25_09590 | P0A8Z5 | - | 2044614 - 2045084 | 17535.7 |
| ll-diaminopimelate aminotransferase | EUU25_09595 | O87320 | - | 2045086 - 2046297 | 44049.8 |
| dead/deah box helicase | EUU25_09600 | P9WH04 | - | 2046379 - 2048232 | 67268.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.