Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lacus |
| Strain | IMCC1753 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lacus IMCC1753
Accession NumberCP035733.1
Gene Summary
Adenine Count
750717 bp
Thymine Count
750271 bp
Guanine Count
976518 bp
Cytosine Count
981137 bp
Genome Length
3458743 bp
Protein-coding Genes
3234 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aldo/keto reductase | EUU25_09455 | P0A9T4 | - | 2019877 - 2020896 | 38010.3 |
| 4-hydroxybenzoate octaprenyltransferase | EUU25_09460 | Q9VHS7 | - | 2020906 - 2021817 | 33221.3 |
| 16s rrna (uracil(1498)-n(3))-methyltransferase | EUU25_09465 | Q92J59 | + | 2021911 - 2022651 | 26512.0 |
| hypothetical protein | EUU25_09470 | Not Available | - | 2022648 - 2024477 | 62015.4 |
| duf11 domain-containing protein | EUU25_09475 | Not Available | + | 2024758 - 2026635 | 63451.4 |
| duf11 domain-containing protein | EUU25_09480 | Not Available | + | 2026696 - 2027631 | 32304.2 |
| glutamate--cysteine ligase | EUU25_09485 | Q1W2L8 | + | 2027681 - 2029054 | 50949.8 |
| tonb-dependent receptor | EUU25_09490 | P46359 | + | 2029135 - 2031447 | 83589.2 |
| Trna-trp | Not Available | Not Available | + | 2031573 - 2031648 | Not Available |
| hypothetical protein | EUU25_09500 | P28911 | - | 2031693 - 2032052 | 12925.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.