Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lacus |
| Strain | IMCC1753 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lacus IMCC1753
Accession NumberCP035733.1
Gene Summary
Adenine Count
750717 bp
Thymine Count
750271 bp
Guanine Count
976518 bp
Cytosine Count
981137 bp
Genome Length
3458743 bp
Protein-coding Genes
3234 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tryptophan-rich sensory protein | EUU25_09405 | P17057 | - | 2006887 - 2007363 | 17419.7 |
| hypothetical protein | EUU25_09410 | Not Available | - | 2007747 - 2008445 | 25611.1 |
| dna photolyase fad-binding protein | EUU25_09415 | P12768 | + | 2008635 - 2009834 | 44663.7 |
| hypothetical protein | EUU25_09420 | Not Available | - | 2009831 - 2010283 | 15710.2 |
| alpha/beta fold hydrolase | EUU25_09425 | Q92ZM6 | - | 2010354 - 2011589 | 44113.4 |
| hotdog fold thioesterase | EUU25_09430 | Q9I3A4 | - | 2011679 - 2012116 | 15812.9 |
| phytase | EUU25_09435 | P42094 | - | 2012164 - 2013198 | 36086.9 |
| tonb-dependent receptor | EUU25_09440 | Not Available | - | 2013198 - 2016014 | 103215.0 |
| rna degradosome polyphosphate kinase | EUU25_09445 | Q2NC49 | + | 2016188 - 2018344 | 80627.6 |
| ppx/gppa family phosphatase | EUU25_09450 | Q9X8H1 | + | 2018341 - 2019807 | 52312.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.