Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lacus |
| Strain | IMCC1753 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lacus IMCC1753
Accession NumberCP035733.1
Gene Summary
Adenine Count
750717 bp
Thymine Count
750271 bp
Guanine Count
976518 bp
Cytosine Count
981137 bp
Genome Length
3458743 bp
Protein-coding Genes
3234 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | EUU25_09005 | Not Available | - | 1923336 - 1923788 | 16487.0 |
| hypothetical protein | EUU25_09010 | Not Available | + | 1924125 - 1924454 | 10752.4 |
| type iv conjugative transfer system protein tral | EUU25_09015 | P12058 | + | 1924483 - 1924770 | 10575.9 |
| conjugal transfer protein trae | EUU25_09020 | P12057 | + | 1924780 - 1925361 | 21139.4 |
| conjugal transfer protein trak | EUU25_09025 | Not Available | + | 1925345 - 1926088 | 26502.6 |
| conjugal transfer protein trab | EUU25_09030 | P41067 | + | 1926081 - 1927436 | 46249.8 |
| dsbc family protein | EUU25_09035 | P55890 | + | 1927433 - 1928296 | 30014.1 |
| conjugal transfer protein trav | EUU25_09040 | Not Available | + | 1928302 - 1929009 | 24798.1 |
| type iv secretion system protein trac | EUU25_09045 | P18004 | + | 1929009 - 1931555 | 93246.6 |
| hypothetical protein | EUU25_09050 | Not Available | + | 1931582 - 1931971 | 14676.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.